Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm42430-201ENSMUST00000197209 616 ntBASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 BC106175-202ENSMUST00000219344 1213 ntBASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 AC164556.1-201ENSMUST00000221318 751 ntBASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm22594-201ENSMUST00000104251 130 ntBASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm18014-201ENSMUST00000183369 817 ntBASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm19013-201ENSMUST00000183895 1222 ntBASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm19014-201ENSMUST00000184828 1189 ntBASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm37365-201ENSMUST00000193109 409 ntBASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm7880-201ENSMUST00000203748 871 ntBASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pkd1l3Q2EG98 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Mir671-201ENSMUST00000102432 98 ntBASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Gm22846-201ENSMUST00000157706 270 ntBASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Gm26272-201ENSMUST00000179241 132 ntBASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Gm9916-201ENSMUST00000192943 1228 ntBASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 AC164429.1-201ENSMUST00000224210 518 ntBASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pkd1l3Q2EG98 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms