Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.3□□□□□ -0.92
SgcaP82350 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
SgcaP82350 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC9.3□□□□□ -0.92
SgcaP82350 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
SgcaP82350 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
SgcaP82350 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC9.3□□□□□ -0.92
SgcaP82350 Tcf7l2-208ENSMUST00000111654 3059 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
SgcaP82350 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.3□□□□□ -0.92
SgcaP82350 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
SgcaP82350 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.29□□□□□ -0.92
SgcaP82350 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Gm37962-201ENSMUST00000195535 2034 ntBASIC9.29□□□□□ -0.92
SgcaP82350 Gm26670-201ENSMUST00000180429 3287 ntBASIC9.29□□□□□ -0.92
SgcaP82350 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.29□□□□□ -0.92
SgcaP82350 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
SgcaP82350 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
SgcaP82350 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
SgcaP82350 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC9.29□□□□□ -0.92
SgcaP82350 Gm12015-201ENSMUST00000117065 843 ntBASIC9.29□□□□□ -0.92
SgcaP82350 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.29□□□□□ -0.92
SgcaP82350 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.29□□□□□ -0.92
SgcaP82350 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.29□□□□□ -0.92
SgcaP82350 Gm5070-201ENSMUST00000177599 862 ntBASIC9.29□□□□□ -0.92
SgcaP82350 Gm37597-201ENSMUST00000191853 382 ntBASIC9.29□□□□□ -0.92
SgcaP82350 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.29□□□□□ -0.92
SgcaP82350 Gm38158-201ENSMUST00000194617 339 ntBASIC9.29□□□□□ -0.92
SgcaP82350 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC9.29□□□□□ -0.92
SgcaP82350 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.29□□□□□ -0.92
SgcaP82350 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Gm5705-201ENSMUST00000066241 711 ntBASIC9.29□□□□□ -0.92
SgcaP82350 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
SgcaP82350 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
SgcaP82350 Gm8399-201ENSMUST00000082300 1117 ntBASIC9.29□□□□□ -0.92
SgcaP82350 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC9.29□□□□□ -0.92
SgcaP82350 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
SgcaP82350 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.29□□□□□ -0.92
SgcaP82350 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.29□□□□□ -0.92
SgcaP82350 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC9.29□□□□□ -0.92
SgcaP82350 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.29□□□□□ -0.92
SgcaP82350 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.29□□□□□ -0.92
SgcaP82350 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
SgcaP82350 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
SgcaP82350 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.29□□□□□ -0.92
SgcaP82350 AC154186.1-201ENSMUST00000227711 1597 ntBASIC9.29□□□□□ -0.92
SgcaP82350 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
SgcaP82350 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SgcaP82350 Gm37040-201ENSMUST00000191740 1824 ntBASIC9.28□□□□□ -0.92
SgcaP82350 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
SgcaP82350 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
SgcaP82350 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC9.28□□□□□ -0.92
SgcaP82350 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
SgcaP82350 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
SgcaP82350 Trav4d-2-201ENSMUST00000120914 335 ntBASIC9.28□□□□□ -0.92
SgcaP82350 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
SgcaP82350 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9.28□□□□□ -0.92
SgcaP82350 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 172.1 ms