Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CiitaP79621 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.03□□□□□ -0.48
CiitaP79621 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.03□□□□□ -0.48
CiitaP79621 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.03□□□□□ -0.48
CiitaP79621 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.02□□□□□ -0.48
CiitaP79621 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.02□□□□□ -0.48
CiitaP79621 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CiitaP79621 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CiitaP79621 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CiitaP79621 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CiitaP79621 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.02□□□□□ -0.49
CiitaP79621 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Gm18014-201ENSMUST00000183369 817 ntBASIC12.02□□□□□ -0.49
CiitaP79621 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.02□□□□□ -0.49
CiitaP79621 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
CiitaP79621 Gm35713-201ENSMUST00000210516 199 ntBASIC12.02□□□□□ -0.49
CiitaP79621 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
CiitaP79621 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.02□□□□□ -0.49
CiitaP79621 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.02□□□□□ -0.49
CiitaP79621 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.02□□□□□ -0.49
CiitaP79621 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CiitaP79621 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CiitaP79621 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
CiitaP79621 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.02□□□□□ -0.49
CiitaP79621 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.02□□□□□ -0.49
CiitaP79621 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.02□□□□□ -0.49
CiitaP79621 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
CiitaP79621 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CiitaP79621 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.02□□□□□ -0.49
CiitaP79621 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CiitaP79621 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CiitaP79621 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CiitaP79621 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.01□□□□□ -0.49
CiitaP79621 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.01□□□□□ -0.49
CiitaP79621 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CiitaP79621 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
CiitaP79621 Gm25880-201ENSMUST00000104331 132 ntBASIC12.01□□□□□ -0.49
CiitaP79621 Gm11380-201ENSMUST00000118067 560 ntBASIC12.01□□□□□ -0.49
CiitaP79621 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CiitaP79621 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.01□□□□□ -0.49
CiitaP79621 Gm42660-201ENSMUST00000197733 947 ntBASIC12.01□□□□□ -0.49
CiitaP79621 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.01□□□□□ -0.49
CiitaP79621 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.01□□□□□ -0.49
CiitaP79621 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.01□□□□□ -0.49
CiitaP79621 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.01□□□□□ -0.49
CiitaP79621 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.01□□□□□ -0.49
CiitaP79621 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.01□□□□□ -0.49
CiitaP79621 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.01□□□□□ -0.49
CiitaP79621 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CiitaP79621 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CiitaP79621 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms