Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Mrpl11-201ENSMUST00000025836 2882 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Zfp82-203ENSMUST00000182546 1964 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
Rps28P62858 Apobec3-201ENSMUST00000023054 1842 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Slc30a2-202ENSMUST00000105872 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Gm37048-201ENSMUST00000194827 5578 ntBASIC6.29□□□□□ -1.4
Rps28P62858 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Zmiz2-202ENSMUST00000102914 3806 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Igsf1-202ENSMUST00000072037 2515 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Mettl6-209ENSMUST00000228727 2388 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Rps28P62858 Atp5g1-204ENSMUST00000178611 4660 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Myt1l-205ENSMUST00000218583 4522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Gm42572-201ENSMUST00000202292 3378 ntBASIC6.29□□□□□ -1.4
Rps28P62858 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Vill-201ENSMUST00000051386 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Pparg-201ENSMUST00000000450 1767 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Parp9-202ENSMUST00000114877 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rps28P62858 Gm7208-202ENSMUST00000212442 1627 ntBASIC6.28□□□□□ -1.4
Rps28P62858 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Rps28P62858 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC6.28□□□□□ -1.4
Rps28P62858 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC6.28□□□□□ -1.4
Rps28P62858 Gm42759-201ENSMUST00000195915 2439 ntBASIC6.28□□□□□ -1.4
Rps28P62858 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC6.28□□□□□ -1.4
Rps28P62858 Cacna1c-213ENSMUST00000188078 6519 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Rps28P62858 Cacna1c-217ENSMUST00000188865 6519 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Rps28P62858 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC6.28□□□□□ -1.4
Rps28P62858 Mterf4-203ENSMUST00000112944 3097 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Sh3pxd2b-201ENSMUST00000038753 7413 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Rps28P62858 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Steap4-201ENSMUST00000115421 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Nipal4-201ENSMUST00000020679 3444 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Rps28P62858 Meig1-205ENSMUST00000115084 643 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Rps28P62858 Gm11185-201ENSMUST00000117732 1007 ntBASIC6.28□□□□□ -1.4
Rps28P62858 Gm16209-201ENSMUST00000118457 627 ntBASIC6.28□□□□□ -1.4
Rps28P62858 Gm12271-201ENSMUST00000121719 414 ntBASIC6.28□□□□□ -1.4
Rps28P62858 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Rps28P62858 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC6.28□□□□□ -1.4
Rps28P62858 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Rps28P62858 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Rps28P62858 Gm3912-202ENSMUST00000210164 643 ntTSL 3 BASIC6.28□□□□□ -1.4
Rps28P62858 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Rps28P62858 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Rps28P62858 AC154436.1-201ENSMUST00000227272 782 ntBASIC6.28□□□□□ -1.4
Rps28P62858 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Rps28P62858 Vmn1r201-201ENSMUST00000091730 903 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Rps28P62858 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Rps28P62858 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Txndc16-201ENSMUST00000022377 4028 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Elmo1-201ENSMUST00000072519 5464 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 AC124732.3-201ENSMUST00000221835 1765 ntBASIC6.28□□□□□ -1.4
Rps28P62858 Gm43686-201ENSMUST00000197351 2439 ntBASIC6.28□□□□□ -1.4
Rps28P62858 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Ano4-204ENSMUST00000182341 3959 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Rps28P62858 Gm10482-202ENSMUST00000189825 2287 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Gm38024-201ENSMUST00000192338 2532 ntBASIC6.28□□□□□ -1.4
Rps28P62858 Cpsf3-211ENSMUST00000222968 1858 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Rars2-201ENSMUST00000029968 1868 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Txndc16-209ENSMUST00000153383 3691 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Trim9-203ENSMUST00000167755 4559 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Ncaph2-202ENSMUST00000074552 3299 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rps28P62858 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Rps28P62858 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Rps28P62858 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Rps28P62858 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
Rps28P62858 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Rps28P62858 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Rps28P62858 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Rps28P62858 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Rps28P62858 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Rps28P62858 Gm6820-201ENSMUST00000188803 2173 ntBASIC6.27□□□□□ -1.41
Rps28P62858 Gm29427-201ENSMUST00000188520 1909 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Rps28P62858 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms