Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC12.34□□□□□ -0.43
Tpm1P58771 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.34□□□□□ -0.43
Tpm1P58771 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.34□□□□□ -0.43
Tpm1P58771 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tpm1P58771 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.34□□□□□ -0.43
Tpm1P58771 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.34□□□□□ -0.43
Tpm1P58771 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Tpm1P58771 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tpm1P58771 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.34□□□□□ -0.43
Tpm1P58771 Mir1896-201ENSMUST00000122641 81 ntBASIC12.34□□□□□ -0.43
Tpm1P58771 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Gm25700-201ENSMUST00000177693 110 ntBASIC12.34□□□□□ -0.43
Tpm1P58771 Gm28071-201ENSMUST00000190355 478 ntBASIC12.34□□□□□ -0.43
Tpm1P58771 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.34□□□□□ -0.43
Tpm1P58771 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Tpm1P58771 Gm45224-201ENSMUST00000208203 414 ntBASIC12.34□□□□□ -0.43
Tpm1P58771 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Gm270-201ENSMUST00000223010 976 ntBASIC12.34□□□□□ -0.43
Tpm1P58771 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Tpm1P58771 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Tpm1P58771 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Tpm1P58771 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Tpm1P58771 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.34□□□□□ -0.43
Tpm1P58771 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.34□□□□□ -0.43
Tpm1P58771 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Tpm1P58771 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.34□□□□□ -0.43
Tpm1P58771 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tpm1P58771 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tpm1P58771 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tpm1P58771 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tpm1P58771 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tpm1P58771 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tpm1P58771 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Tpm1P58771 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Tpm1P58771 Gm12857-201ENSMUST00000117678 592 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 Gm15617-201ENSMUST00000118973 771 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.33□□□□□ -0.44
Tpm1P58771 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.33□□□□□ -0.44
Tpm1P58771 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tpm1P58771 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 AA914427-201ENSMUST00000193194 1166 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 Gm38266-201ENSMUST00000194931 421 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 Gm5714-201ENSMUST00000197343 566 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tpm1P58771 Gm6108-201ENSMUST00000208365 367 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 Gm7399-201ENSMUST00000032395 858 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tpm1P58771 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tpm1P58771 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tpm1P58771 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Tpm1P58771 Gm43372-201ENSMUST00000202662 3016 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tpm1P58771 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.33□□□□□ -0.44
Tpm1P58771 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Tpm1P58771 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tpm1P58771 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tpm1P58771 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tpm1P58771 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tpm1P58771 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tpm1P58771 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Tpm1P58771 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tpm1P58771 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tpm1P58771 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Tpm1P58771 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tpm1P58771 Gm14381-201ENSMUST00000122105 414 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms