Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Atxn1P54254 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.09□□□□□ -0.63
Atxn1P54254 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Atxn1P54254 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.09□□□□□ -0.63
Atxn1P54254 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Atxn1P54254 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atxn1P54254 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.09□□□□□ -0.63
Atxn1P54254 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Atxn1P54254 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Atxn1P54254 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.08□□□□□ -0.64
Atxn1P54254 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Atxn1P54254 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
Atxn1P54254 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.08□□□□□ -0.64
Atxn1P54254 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Atxn1P54254 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.08□□□□□ -0.64
Atxn1P54254 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Atxn1P54254 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Gm11475-201ENSMUST00000118482 476 ntBASIC11.08□□□□□ -0.64
Atxn1P54254 Defa-ps17-201ENSMUST00000121849 171 ntBASIC11.08□□□□□ -0.64
Atxn1P54254 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC11.08□□□□□ -0.64
Atxn1P54254 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.08□□□□□ -0.64
Atxn1P54254 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.08□□□□□ -0.64
Atxn1P54254 Gm25569-201ENSMUST00000157175 131 ntBASIC11.08□□□□□ -0.64
Atxn1P54254 Gm25492-201ENSMUST00000157383 129 ntBASIC11.08□□□□□ -0.64
Atxn1P54254 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Atxn1P54254 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.08□□□□□ -0.64
Atxn1P54254 Mir7035-201ENSMUST00000184713 82 ntBASIC11.08□□□□□ -0.64
Atxn1P54254 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Atxn1P54254 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.08□□□□□ -0.64
Atxn1P54254 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.08□□□□□ -0.64
Atxn1P54254 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Atxn1P54254 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.08□□□□□ -0.64
Atxn1P54254 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Atxn1P54254 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.08□□□□□ -0.64
Atxn1P54254 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.08□□□□□ -0.64
Atxn1P54254 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Atxn1P54254 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.08□□□□□ -0.64
Atxn1P54254 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atxn1P54254 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.07□□□□□ -0.64
Atxn1P54254 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Atxn1P54254 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Atxn1P54254 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Atxn1P54254 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Atxn1P54254 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atxn1P54254 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC11.07□□□□□ -0.64
Atxn1P54254 Gm9372-201ENSMUST00000168454 430 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms