Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.72□□□□□ -0.53
Shmt1P50431 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.72□□□□□ -0.53
Shmt1P50431 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.72□□□□□ -0.53
Shmt1P50431 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.72□□□□□ -0.53
Shmt1P50431 Gm26976-201ENSMUST00000182929 908 ntBASIC11.72□□□□□ -0.53
Shmt1P50431 Gm19927-201ENSMUST00000185792 781 ntBASIC11.72□□□□□ -0.53
Shmt1P50431 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.72□□□□□ -0.53
Shmt1P50431 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.72□□□□□ -0.53
Shmt1P50431 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.72□□□□□ -0.53
Shmt1P50431 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.72□□□□□ -0.53
Shmt1P50431 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Shmt1P50431 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Shmt1P50431 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Shmt1P50431 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Shmt1P50431 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.72□□□□□ -0.53
Shmt1P50431 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Shmt1P50431 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.72□□□□□ -0.53
Shmt1P50431 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Shmt1P50431 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt1P50431 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.72□□□□□ -0.53
Shmt1P50431 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Shmt1P50431 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Shmt1P50431 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.71□□□□□ -0.53
Shmt1P50431 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.71□□□□□ -0.53
Shmt1P50431 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.71□□□□□ -0.53
Shmt1P50431 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.71□□□□□ -0.53
Shmt1P50431 Gm16165-201ENSMUST00000160140 795 ntBASIC11.71□□□□□ -0.53
Shmt1P50431 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.71□□□□□ -0.53
Shmt1P50431 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Shmt1P50431 Gm25951-201ENSMUST00000175330 64 ntBASIC11.71□□□□□ -0.53
Shmt1P50431 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.71□□□□□ -0.53
Shmt1P50431 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Shmt1P50431 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Shmt1P50431 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Shmt1P50431 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Shmt1P50431 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt1P50431 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shmt1P50431 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Shmt1P50431 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.71□□□□□ -0.54
Shmt1P50431 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shmt1P50431 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shmt1P50431 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.71□□□□□ -0.54
Shmt1P50431 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Shmt1P50431 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shmt1P50431 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shmt1P50431 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.71□□□□□ -0.54
Shmt1P50431 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shmt1P50431 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Shmt1P50431 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Shmt1P50431 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Shmt1P50431 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.7□□□□□ -0.54
Shmt1P50431 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shmt1P50431 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 460.6 ms