Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rfx3P48381 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.03□□□□□ -0.8
Rfx3P48381 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Rfx3P48381 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Rfx3P48381 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.03□□□□□ -0.8
Rfx3P48381 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.03□□□□□ -0.8
Rfx3P48381 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Gm23200-201ENSMUST00000104379 132 ntBASIC10.03□□□□□ -0.8
Rfx3P48381 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Rfx3P48381 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.03□□□□□ -0.8
Rfx3P48381 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.03□□□□□ -0.8
Rfx3P48381 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.03□□□□□ -0.8
Rfx3P48381 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.03□□□□□ -0.8
Rfx3P48381 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.03□□□□□ -0.8
Rfx3P48381 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Rfx3P48381 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.03□□□□□ -0.8
Rfx3P48381 Gm12407-201ENSMUST00000180219 324 ntBASIC10.03□□□□□ -0.8
Rfx3P48381 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Rfx3P48381 Mir6927-201ENSMUST00000184494 71 ntBASIC10.03□□□□□ -0.8
Rfx3P48381 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Gm45856-201ENSMUST00000212752 416 ntBASIC10.03□□□□□ -0.8
Rfx3P48381 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.03□□□□□ -0.8
Rfx3P48381 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Rfx3P48381 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Rfx3P48381 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.03□□□□□ -0.8
Rfx3P48381 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.03□□□□□ -0.8
Rfx3P48381 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Rfx3P48381 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rfx3P48381 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.03□□□□□ -0.8
Rfx3P48381 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rfx3P48381 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rfx3P48381 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Rfx3P48381 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rfx3P48381 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rfx3P48381 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rfx3P48381 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Rfx3P48381 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Rfx3P48381 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Rfx3P48381 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Gm14193-201ENSMUST00000105067 153 ntBASIC10.02□□□□□ -0.81
Rfx3P48381 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.02□□□□□ -0.81
Rfx3P48381 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.02□□□□□ -0.81
Rfx3P48381 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.02□□□□□ -0.81
Rfx3P48381 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.02□□□□□ -0.81
Rfx3P48381 Gm22846-201ENSMUST00000157706 270 ntBASIC10.02□□□□□ -0.81
Rfx3P48381 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.02□□□□□ -0.81
Rfx3P48381 Mir5120-201ENSMUST00000175020 78 ntBASIC10.02□□□□□ -0.81
Rfx3P48381 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.02□□□□□ -0.81
Rfx3P48381 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.02□□□□□ -0.81
Rfx3P48381 Gm9540-201ENSMUST00000188230 478 ntBASIC10.02□□□□□ -0.81
Rfx3P48381 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.02□□□□□ -0.81
Rfx3P48381 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.02□□□□□ -0.81
Rfx3P48381 Gm44506-201ENSMUST00000206278 965 ntBASIC10.02□□□□□ -0.81
Rfx3P48381 Gm7848-201ENSMUST00000210739 718 ntBASIC10.02□□□□□ -0.81
Rfx3P48381 Gm5996-201ENSMUST00000211110 718 ntBASIC10.02□□□□□ -0.81
Rfx3P48381 Gm5369-201ENSMUST00000217499 588 ntBASIC10.02□□□□□ -0.81
Rfx3P48381 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.02□□□□□ -0.81
Rfx3P48381 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.02□□□□□ -0.81
Rfx3P48381 Gm1821-202ENSMUST00000227415 750 ntBASIC10.02□□□□□ -0.81
Rfx3P48381 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms