Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.44□□□□□ -0.58
Cxcl12P40224 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.44□□□□□ -0.58
Cxcl12P40224 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Cxcl12P40224 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Cxcl12P40224 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cxcl12P40224 Gm14997-201ENSMUST00000119232 636 ntBASIC11.44□□□□□ -0.58
Cxcl12P40224 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cxcl12P40224 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cxcl12P40224 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cxcl12P40224 Gm17799-201ENSMUST00000183270 667 ntBASIC11.44□□□□□ -0.58
Cxcl12P40224 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cxcl12P40224 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Gm40332-201ENSMUST00000199847 938 ntBASIC11.44□□□□□ -0.58
Cxcl12P40224 Gm45090-201ENSMUST00000208775 1148 ntBASIC11.44□□□□□ -0.58
Cxcl12P40224 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Cxcl12P40224 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cxcl12P40224 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.44□□□□□ -0.58
Cxcl12P40224 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cxcl12P40224 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.44□□□□□ -0.58
Cxcl12P40224 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.44□□□□□ -0.58
Cxcl12P40224 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Gm5472-201ENSMUST00000178604 1678 ntBASIC11.43□□□□□ -0.58
Cxcl12P40224 Gm10537-201ENSMUST00000192625 1698 ntBASIC11.43□□□□□ -0.58
Cxcl12P40224 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Cxcl12P40224 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.43□□□□□ -0.58
Cxcl12P40224 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cxcl12P40224 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC11.43□□□□□ -0.58
Cxcl12P40224 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Mir598-201ENSMUST00000102094 79 ntBASIC11.43□□□□□ -0.58
Cxcl12P40224 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cxcl12P40224 Gm14639-201ENSMUST00000120850 866 ntBASIC11.43□□□□□ -0.58
Cxcl12P40224 Gm15793-201ENSMUST00000121857 495 ntBASIC11.43□□□□□ -0.58
Cxcl12P40224 Gm23432-201ENSMUST00000157181 131 ntBASIC11.43□□□□□ -0.58
Cxcl12P40224 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Mir7088-201ENSMUST00000184227 86 ntBASIC11.43□□□□□ -0.58
Cxcl12P40224 Gm42732-201ENSMUST00000202887 1197 ntBASIC11.43□□□□□ -0.58
Cxcl12P40224 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cxcl12P40224 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Cxcl12P40224 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Cxcl12P40224 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cxcl12P40224 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.43□□□□□ -0.58
Cxcl12P40224 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.43□□□□□ -0.58
Cxcl12P40224 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.43□□□□□ -0.58
Cxcl12P40224 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Cxcl12P40224 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.43□□□□□ -0.58
Cxcl12P40224 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cxcl12P40224 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cxcl12P40224 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.42□□□□□ -0.58
Cxcl12P40224 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cxcl12P40224 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cxcl12P40224 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cxcl12P40224 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cxcl12P40224 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl12P40224 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms