Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
P20040 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P20040 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
P20040 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
P20040 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
P20040 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.88□□□□□ -0.83
P20040 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.88□□□□□ -0.83
P20040 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
P20040 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P20040 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
P20040 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
P20040 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
P20040 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
P20040 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P20040 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
P20040 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
P20040 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
P20040 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
P20040 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Gm14193-201ENSMUST00000105067 153 ntBASIC9.87□□□□□ -0.83
P20040 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
P20040 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.87□□□□□ -0.83
P20040 Mir1943-201ENSMUST00000158276 73 ntBASIC9.87□□□□□ -0.83
P20040 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.87□□□□□ -0.83
P20040 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
P20040 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC9.87□□□□□ -0.83
P20040 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.87□□□□□ -0.83
P20040 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.87□□□□□ -0.83
P20040 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.87□□□□□ -0.83
P20040 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
P20040 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
P20040 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
P20040 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.87□□□□□ -0.83
P20040 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
P20040 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
P20040 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
P20040 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.86□□□□□ -0.83
P20040 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
P20040 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.86□□□□□ -0.83
P20040 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Gm22144-201ENSMUST00000157402 102 ntBASIC9.86□□□□□ -0.83
P20040 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
P20040 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Mir8093-201ENSMUST00000185043 137 ntBASIC9.86□□□□□ -0.83
P20040 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC9.86□□□□□ -0.83
P20040 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.86□□□□□ -0.83
P20040 Gm18065-201ENSMUST00000221395 526 ntBASIC9.86□□□□□ -0.83
P20040 AC154680.1-201ENSMUST00000224376 859 ntBASIC9.86□□□□□ -0.83
P20040 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
P20040 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
P20040 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
P20040 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
P20040 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P20040 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
P20040 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms