Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.1□□□□□ -0.47
Chmp6P0C0A3 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Gm37905-201ENSMUST00000195310 341 ntBASIC12.1□□□□□ -0.47
Chmp6P0C0A3 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.1□□□□□ -0.47
Chmp6P0C0A3 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.1□□□□□ -0.47
Chmp6P0C0A3 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.1□□□□□ -0.47
Chmp6P0C0A3 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Snora73b-201ENSMUST00000083419 205 ntBASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Gm4294-201ENSMUST00000105169 614 ntBASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Gm13422-201ENSMUST00000118834 504 ntBASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Gm15617-201ENSMUST00000118973 771 ntBASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Gm1848-201ENSMUST00000120711 789 ntBASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Gm2875-201ENSMUST00000211333 360 ntBASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp6P0C0A3 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Chmp6P0C0A3 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Chmp6P0C0A3 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chmp6P0C0A3 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chmp6P0C0A3 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Gm14942-201ENSMUST00000119642 336 ntBASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Gm11667-201ENSMUST00000119828 486 ntBASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Gm25492-201ENSMUST00000157383 129 ntBASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Gm24514-201ENSMUST00000174961 285 ntBASIC12.08□□□□□ -0.48
Chmp6P0C0A3 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms