Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm42689-201ENSMUST00000202403 404 ntBASIC14.31□□□□□ -0.12
Hoxc9P09633 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC14.31□□□□□ -0.12
Hoxc9P09633 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC14.31□□□□□ -0.12
Hoxc9P09633 AC155300.1-201ENSMUST00000219134 480 ntBASIC14.31□□□□□ -0.12
Hoxc9P09633 AC154806.7-201ENSMUST00000227998 202 ntBASIC14.31□□□□□ -0.12
Hoxc9P09633 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.31□□□□□ -0.12
Hoxc9P09633 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc9P09633 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Hoxc9P09633 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxc9P09633 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc9P09633 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc9P09633 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC14.3□□□□□ -0.12
Hoxc9P09633 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Hoxc9P09633 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc9P09633 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Hoxc9P09633 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hoxc9P09633 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc9P09633 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Mir1941-201ENSMUST00000157834 83 ntBASIC14.3□□□□□ -0.12
Hoxc9P09633 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc9P09633 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Gm3926-201ENSMUST00000223378 1123 ntBASIC14.3□□□□□ -0.12
Hoxc9P09633 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Hoxc9P09633 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Hoxc9P09633 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.3□□□□□ -0.12
Hoxc9P09633 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc9P09633 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxc9P09633 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hoxc9P09633 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc9P09633 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc9P09633 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc9P09633 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc9P09633 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc9P09633 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc9P09633 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc9P09633 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC14.29□□□□□ -0.12
Hoxc9P09633 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC14.29□□□□□ -0.12
Hoxc9P09633 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC14.29□□□□□ -0.12
Hoxc9P09633 Gm24346-201ENSMUST00000158712 194 ntBASIC14.29□□□□□ -0.12
Hoxc9P09633 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC14.29□□□□□ -0.12
Hoxc9P09633 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Gm7985-201ENSMUST00000183329 981 ntBASIC14.29□□□□□ -0.12
Hoxc9P09633 Mir6359-201ENSMUST00000183668 81 ntBASIC14.29□□□□□ -0.12
Hoxc9P09633 Gm7255-201ENSMUST00000187371 908 ntBASIC14.29□□□□□ -0.12
Hoxc9P09633 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxc9P09633 Gm3527-201ENSMUST00000198905 460 ntBASIC14.29□□□□□ -0.12
Hoxc9P09633 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 AC154585.1-201ENSMUST00000218917 997 ntBASIC14.29□□□□□ -0.12
Hoxc9P09633 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 AC154461.3-201ENSMUST00000224831 573 ntBASIC14.29□□□□□ -0.12
Hoxc9P09633 AC101205.2-201ENSMUST00000226206 715 ntBASIC14.29□□□□□ -0.12
Hoxc9P09633 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc9P09633 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc9P09633 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC14.29□□□□□ -0.12
Hoxc9P09633 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms