Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Cacna2d3-208ENSMUST00000225985 918 ntBASIC11.4□□□□□ -0.58
Hoxb3P09026 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC11.4□□□□□ -0.58
Hoxb3P09026 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxb3P09026 Gm23105-201ENSMUST00000083719 134 ntBASIC11.4□□□□□ -0.58
Hoxb3P09026 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hoxb3P09026 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxb3P09026 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.4□□□□□ -0.58
Hoxb3P09026 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.4□□□□□ -0.58
Hoxb3P09026 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.4□□□□□ -0.58
Hoxb3P09026 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxb3P09026 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxb3P09026 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Hoxb3P09026 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxb3P09026 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxb3P09026 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxb3P09026 Gm21064-201ENSMUST00000189723 1375 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Hoxb3P09026 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Hoxb3P09026 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hoxb3P09026 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm23595-201ENSMUST00000104306 130 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm14270-201ENSMUST00000118388 846 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm15615-201ENSMUST00000118876 198 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm22379-201ENSMUST00000157480 131 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm17192-201ENSMUST00000169031 511 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm6098-201ENSMUST00000180234 330 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm29543-201ENSMUST00000188138 967 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm18776-201ENSMUST00000188833 654 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm38233-201ENSMUST00000194259 807 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 BB187690-201ENSMUST00000198619 1176 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 BC080696-201ENSMUST00000202858 1218 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm9487-201ENSMUST00000216600 472 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.39□□□□□ -0.59
Hoxb3P09026 CT025618.1-201ENSMUST00000227409 1279 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 AC115357.1-201ENSMUST00000227575 466 ntBASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Hoxb3P09026 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Hoxb3P09026 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb3P09026 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb3P09026 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb3P09026 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.38□□□□□ -0.59
Hoxb3P09026 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
Hoxb3P09026 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.38□□□□□ -0.59
Hoxb3P09026 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb3P09026 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb3P09026 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC11.38□□□□□ -0.59
Hoxb3P09026 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb3P09026 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.38□□□□□ -0.59
Hoxb3P09026 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb3P09026 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.38□□□□□ -0.59
Hoxb3P09026 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.38□□□□□ -0.59
Hoxb3P09026 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb3P09026 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Hoxb3P09026 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb3P09026 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb3P09026 Gm6755-201ENSMUST00000100598 864 ntBASIC11.38□□□□□ -0.59
Hoxb3P09026 Gm6740-201ENSMUST00000100617 864 ntBASIC11.38□□□□□ -0.59
Hoxb3P09026 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb3P09026 Gm14098-201ENSMUST00000119295 623 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms