Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Gm16219-201ENSMUST00000120096 274 ntBASIC11.31□□□□□ -0.6
PdgfrbP05622 Gm15881-201ENSMUST00000148792 942 ntBASIC11.31□□□□□ -0.6
PdgfrbP05622 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Gm9211-201ENSMUST00000182882 975 ntBASIC11.31□□□□□ -0.6
PdgfrbP05622 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.31□□□□□ -0.6
PdgfrbP05622 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.31□□□□□ -0.6
PdgfrbP05622 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.31□□□□□ -0.6
PdgfrbP05622 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.31□□□□□ -0.6
PdgfrbP05622 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.31□□□□□ -0.6
PdgfrbP05622 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.31□□□□□ -0.6
PdgfrbP05622 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 AC163296.2-201ENSMUST00000220177 1315 ntBASIC11.31□□□□□ -0.6
PdgfrbP05622 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.31□□□□□ -0.6
PdgfrbP05622 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PdgfrbP05622 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.3□□□□□ -0.6
PdgfrbP05622 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.3□□□□□ -0.6
PdgfrbP05622 Gm14585-201ENSMUST00000120713 634 ntBASIC11.3□□□□□ -0.6
PdgfrbP05622 Gm15061-201ENSMUST00000121076 1046 ntBASIC11.3□□□□□ -0.6
PdgfrbP05622 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Gm19246-201ENSMUST00000173599 255 ntBASIC11.3□□□□□ -0.6
PdgfrbP05622 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Gm4870-201ENSMUST00000198525 1251 ntBASIC11.3□□□□□ -0.6
PdgfrbP05622 Gm42516-201ENSMUST00000198691 767 ntBASIC11.3□□□□□ -0.6
PdgfrbP05622 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.3□□□□□ -0.6
PdgfrbP05622 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.3□□□□□ -0.6
PdgfrbP05622 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.3□□□□□ -0.6
PdgfrbP05622 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.3□□□□□ -0.6
PdgfrbP05622 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.3□□□□□ -0.6
PdgfrbP05622 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.3□□□□□ -0.6
PdgfrbP05622 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PdgfrbP05622 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdgfrbP05622 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PdgfrbP05622 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PdgfrbP05622 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.29□□□□□ -0.6
PdgfrbP05622 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms