Protein–RNA interactions for Protein: F8VPU6

Usp9y, Ubiquitin-specific peptidase 9, Y chromosome, mousemouse

Predictions only

Length 2,556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9yF8VPU6 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Gm9864-201ENSMUST00000090043 1656 ntBASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp9yF8VPU6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm9544-201ENSMUST00000223349 2482 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm6038-201ENSMUST00000154310 948 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm17799-201ENSMUST00000183270 667 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm38063-201ENSMUST00000193990 342 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm34248-201ENSMUST00000200027 474 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 CR974487.1-201ENSMUST00000220984 413 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm16410-201ENSMUST00000094550 774 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm10689-201ENSMUST00000098864 432 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm5171-201ENSMUST00000214944 1415 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm5159-201ENSMUST00000212733 1652 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm15258-201ENSMUST00000153801 741 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm16165-201ENSMUST00000160140 795 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Pea15b-202ENSMUST00000183185 555 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Stard3nl-205ENSMUST00000197565 1391 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 AC166359.1-201ENSMUST00000220243 1871 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 AC154589.2-201ENSMUST00000228847 251 ntBASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp9yF8VPU6 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Usp9yF8VPU6 Ssr1-203ENSMUST00000225246 1825 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC8.83□□□□□ -1
Usp9yF8VPU6 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Usp9yF8VPU6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Usp9yF8VPU6 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Gm42498-201ENSMUST00000199981 1372 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 Gm25148-201ENSMUST00000104611 123 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Gm8661-201ENSMUST00000118688 992 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms