Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pcdh1F7BJK1 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Nln-205ENSMUST00000224945 2486 ntBASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm15329-201ENSMUST00000121408 155 ntBASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm12749-201ENSMUST00000122138 1159 ntBASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm24749-201ENSMUST00000157838 343 ntBASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm43058-201ENSMUST00000197645 625 ntBASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.99□□□□□ -0.81
Pcdh1F7BJK1 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm45251-201ENSMUST00000209486 1465 ntBASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm14592-201ENSMUST00000117201 560 ntBASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm13916-201ENSMUST00000117368 628 ntBASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm15549-201ENSMUST00000121595 622 ntBASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm8100-201ENSMUST00000182906 988 ntBASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm28746-201ENSMUST00000187453 380 ntBASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm17825-201ENSMUST00000206836 794 ntBASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm5996-201ENSMUST00000211110 718 ntBASIC9.98□□□□□ -0.81
Pcdh1F7BJK1 Gm18212-201ENSMUST00000211678 889 ntBASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms