Protein–RNA interactions for Protein: Q9WUT7

Ccr9, C-C chemokine receptor type 9, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9Q9WUT7 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Gm14193-201ENSMUST00000105067 153 ntBASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Gm22711-201ENSMUST00000116890 133 ntBASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Gm15595-201ENSMUST00000120840 961 ntBASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Gm11450-201ENSMUST00000121144 333 ntBASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Gm7504-201ENSMUST00000201449 424 ntBASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 AC154171.1-201ENSMUST00000224610 643 ntBASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccr9Q9WUT7 Rims2-204ENSMUST00000226410 3685 ntBASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Snord17-201ENSMUST00000104526 238 ntBASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Gm2260-201ENSMUST00000184965 657 ntBASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Gm37301-201ENSMUST00000195412 568 ntBASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccr9Q9WUT7 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms