Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.81□□□□□ -0.68
Cdh17Q9R100 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Gm32111-201ENSMUST00000207689 846 ntBASIC10.81□□□□□ -0.68
Cdh17Q9R100 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.81□□□□□ -0.68
Cdh17Q9R100 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.81□□□□□ -0.68
Cdh17Q9R100 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.81□□□□□ -0.68
Cdh17Q9R100 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.81□□□□□ -0.68
Cdh17Q9R100 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.81□□□□□ -0.68
Cdh17Q9R100 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Gm23105-201ENSMUST00000083719 134 ntBASIC10.81□□□□□ -0.68
Cdh17Q9R100 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.81□□□□□ -0.68
Cdh17Q9R100 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh17Q9R100 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.8□□□□□ -0.68
Cdh17Q9R100 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.8□□□□□ -0.68
Cdh17Q9R100 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Gm23061-201ENSMUST00000102348 116 ntBASIC10.8□□□□□ -0.68
Cdh17Q9R100 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Gm22144-201ENSMUST00000157402 102 ntBASIC10.8□□□□□ -0.68
Cdh17Q9R100 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Mir6927-201ENSMUST00000184494 71 ntBASIC10.8□□□□□ -0.68
Cdh17Q9R100 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.8□□□□□ -0.68
Cdh17Q9R100 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.8□□□□□ -0.68
Cdh17Q9R100 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh17Q9R100 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cdh17Q9R100 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdh17Q9R100 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.79□□□□□ -0.68
Cdh17Q9R100 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.79□□□□□ -0.68
Cdh17Q9R100 Gm25226-201ENSMUST00000158198 123 ntBASIC10.79□□□□□ -0.68
Cdh17Q9R100 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.79□□□□□ -0.68
Cdh17Q9R100 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.79□□□□□ -0.68
Cdh17Q9R100 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Mir7686-201ENSMUST00000200604 57 ntBASIC10.79□□□□□ -0.68
Cdh17Q9R100 Gm44315-201ENSMUST00000203041 219 ntBASIC10.79□□□□□ -0.68
Cdh17Q9R100 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.79□□□□□ -0.68
Cdh17Q9R100 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.79□□□□□ -0.68
Cdh17Q9R100 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.79□□□□□ -0.68
Cdh17Q9R100 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.79□□□□□ -0.68
Cdh17Q9R100 Gm5468-202ENSMUST00000227851 682 ntBASIC10.79□□□□□ -0.68
Cdh17Q9R100 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.79□□□□□ -0.68
Cdh17Q9R100 Gm5451-201ENSMUST00000080545 579 ntBASIC10.79□□□□□ -0.68
Cdh17Q9R100 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Cdh17Q9R100 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.79□□□□□ -0.68
Cdh17Q9R100 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms