Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm14193-201ENSMUST00000105067 153 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm14716-201ENSMUST00000120138 718 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm4726-201ENSMUST00000135604 736 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm6019-201ENSMUST00000148369 736 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm22334-201ENSMUST00000158070 133 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm24844-201ENSMUST00000158679 127 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm5523-201ENSMUST00000180415 997 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm44506-201ENSMUST00000206278 965 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm45770-201ENSMUST00000212105 616 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm45856-201ENSMUST00000212752 416 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a2Q9JLR1 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sec61a2Q9JLR1 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sec61a2Q9JLR1 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.02□□□□□ -0.8
Sec61a2Q9JLR1 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Sec61a2Q9JLR1 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sec61a2Q9JLR1 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sec61a2Q9JLR1 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sec61a2Q9JLR1 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.02□□□□□ -0.8
Sec61a2Q9JLR1 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.8
Sec61a2Q9JLR1 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Sec61a2Q9JLR1 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms