Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm26013-201ENSMUST00000104404 119 ntBASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm11451-201ENSMUST00000118946 630 ntBASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm43163-201ENSMUST00000196571 442 ntBASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2aQ9DB34 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Chmp2aQ9DB34 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.58□□□□□ -0.55
Chmp2aQ9DB34 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Chmp2aQ9DB34 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Chmp2aQ9DB34 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Chmp2aQ9DB34 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Chmp2aQ9DB34 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Gm25766-201ENSMUST00000104101 131 ntBASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Gm28388-201ENSMUST00000186262 437 ntBASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2aQ9DB34 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp2aQ9DB34 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms