Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Khdc3Q9CWU5 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Gm11949-201ENSMUST00000117640 372 ntBASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Gm8737-201ENSMUST00000122208 642 ntBASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Gm25492-201ENSMUST00000157383 129 ntBASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Gm21778-201ENSMUST00000178779 471 ntBASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Gm37806-201ENSMUST00000194524 6387 ntBASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 AC122881.1-201ENSMUST00000225757 2695 ntBASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Khdc3Q9CWU5 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Gm23272-201ENSMUST00000104053 129 ntBASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Gm12218-201ENSMUST00000117666 399 ntBASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 Gm16166-201ENSMUST00000118291 787 ntBASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Khdc3Q9CWU5 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms