Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Gm14395-201ENSMUST00000120494 563 ntBASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.68□□□□□ -0.38
Trim11Q99PQ2 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Gm6991-201ENSMUST00000218475 1178 ntBASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Spcs1-203ENSMUST00000226374 592 ntBASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim11Q99PQ2 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Gm23272-201ENSMUST00000104053 129 ntBASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Gm9062-201ENSMUST00000117712 727 ntBASIC12.67□□□□□ -0.38
Trim11Q99PQ2 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Gm21092-201ENSMUST00000178995 955 ntBASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Gm5468-202ENSMUST00000227851 682 ntBASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.67□□□□□ -0.38
Trim11Q99PQ2 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trim11Q99PQ2 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms