Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Gm42608-201ENSMUST00000197563 2018 ntBASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Gm43633-201ENSMUST00000202455 2330 ntBASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 AC117648.1-201ENSMUST00000219777 2510 ntBASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc28bQ8CEG5 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 AC122382.1-201ENSMUST00000225869 2371 ntBASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Gm15617-201ENSMUST00000118973 771 ntBASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Gm2991-201ENSMUST00000173338 480 ntBASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Gm38151-201ENSMUST00000195085 289 ntBASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Gm45856-201ENSMUST00000212752 416 ntBASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Gm6722-201ENSMUST00000221586 390 ntBASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc28bQ8CEG5 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccdc28bQ8CEG5 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccdc28bQ8CEG5 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ccdc28bQ8CEG5 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccdc28bQ8CEG5 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccdc28bQ8CEG5 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccdc28bQ8CEG5 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC10.96□□□□□ -0.66
Ccdc28bQ8CEG5 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Gm37582-201ENSMUST00000192953 1409 ntBASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Olfml3-204ENSMUST00000169286 874 ntBASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 AY036118-201ENSMUST00000200021 923 ntBASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Gm5302-201ENSMUST00000202130 796 ntBASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc28bQ8CEG5 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms