Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm8199-201ENSMUST00000121323 823 ntBASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Gm38151-201ENSMUST00000195085 289 ntBASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Gm45575-201ENSMUST00000210283 548 ntBASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Gm45856-201ENSMUST00000212752 416 ntBASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Ntng1-201ENSMUST00000051253 327 ntBASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc87Q8CDL9 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Gm12165-201ENSMUST00000117047 342 ntBASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Gm24074-201ENSMUST00000158178 260 ntBASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Olfml3-204ENSMUST00000169286 874 ntBASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Gm37301-201ENSMUST00000195412 568 ntBASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Gm5714-201ENSMUST00000197343 566 ntBASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Gm9555-201ENSMUST00000200908 583 ntBASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Gm44100-201ENSMUST00000204329 436 ntBASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc87Q8CDL9 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms