Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.92□□□□□ -0.34
Alx1Q8C8B0 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.92□□□□□ -0.34
Alx1Q8C8B0 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.92□□□□□ -0.34
Alx1Q8C8B0 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.92□□□□□ -0.34
Alx1Q8C8B0 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.92□□□□□ -0.34
Alx1Q8C8B0 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx1Q8C8B0 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Gm12990-201ENSMUST00000120372 468 ntBASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Gm5244-201ENSMUST00000164001 339 ntBASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Gm24809-201ENSMUST00000175318 271 ntBASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Gm37365-201ENSMUST00000193109 409 ntBASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Gm8181-201ENSMUST00000062242 669 ntBASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Alx1Q8C8B0 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.9□□□□□ -0.34
Alx1Q8C8B0 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Mir7035-201ENSMUST00000184713 82 ntBASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Gm42660-201ENSMUST00000197733 947 ntBASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Gm5865-201ENSMUST00000198713 637 ntBASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.9□□□□□ -0.34
Alx1Q8C8B0 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms