Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smco3Q8BQM7 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Smco3Q8BQM7 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
Smco3Q8BQM7 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smco3Q8BQM7 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smco3Q8BQM7 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.12□□□□□ -0.95
Smco3Q8BQM7 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.12□□□□□ -0.95
Smco3Q8BQM7 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Gm6203-201ENSMUST00000209575 1342 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Gm26047-201ENSMUST00000157308 113 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Gm26047-202ENSMUST00000198840 115 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Gm6450-201ENSMUST00000200896 574 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Morn2-202ENSMUST00000227729 656 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Gm45597-201ENSMUST00000211524 1994 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smco3Q8BQM7 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Ncoa3-201ENSMUST00000088095 7531 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm22018-201ENSMUST00000104357 131 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm14660-201ENSMUST00000119809 575 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms