Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm25514-201ENSMUST00000083860 135 ntBASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ddx55Q6ZPL9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Gm15815-201ENSMUST00000120569 255 ntBASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Gm8170-201ENSMUST00000218581 945 ntBASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 AC101205.2-201ENSMUST00000226206 715 ntBASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx55Q6ZPL9 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ddx55Q6ZPL9 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ddx55Q6ZPL9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Ddx55Q6ZPL9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ddx55Q6ZPL9 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ddx55Q6ZPL9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Gm8873-201ENSMUST00000217847 1439 ntBASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Gm5510-201ENSMUST00000117826 486 ntBASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Gm8643-201ENSMUST00000195228 625 ntBASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Gm38349-201ENSMUST00000195732 462 ntBASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Gm43811-201ENSMUST00000202862 695 ntBASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Gm45745-201ENSMUST00000211447 1180 ntBASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 AC103672.1-201ENSMUST00000227502 365 ntBASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 CT010505.2-201ENSMUST00000227918 998 ntBASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Gm10254-201ENSMUST00000052888 867 ntBASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx55Q6ZPL9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms