Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm37284-201ENSMUST00000193607 539 ntBASIC11.82□□□□□ -0.52
Syne3Q4FZC9 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Gm44315-201ENSMUST00000203041 219 ntBASIC11.82□□□□□ -0.52
Syne3Q4FZC9 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.82□□□□□ -0.52
Syne3Q4FZC9 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Gm5451-201ENSMUST00000080545 579 ntBASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.82□□□□□ -0.52
Syne3Q4FZC9 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Gm15131-201ENSMUST00000119124 595 ntBASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Gm11246-201ENSMUST00000120880 345 ntBASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Gm19459-201ENSMUST00000176240 835 ntBASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Gm3551-201ENSMUST00000190750 664 ntBASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Syne3Q4FZC9 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Gm4294-201ENSMUST00000105169 614 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms