Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.03□□□□□ -0.48
Col9a2Q07643 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Col9a2Q07643 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Mir671-201ENSMUST00000102432 98 ntBASIC12.03□□□□□ -0.48
Col9a2Q07643 Mir744-201ENSMUST00000103261 100 ntBASIC12.03□□□□□ -0.48
Col9a2Q07643 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col9a2Q07643 Gm6158-201ENSMUST00000109467 904 ntBASIC12.03□□□□□ -0.48
Col9a2Q07643 Gm15136-201ENSMUST00000120552 533 ntBASIC12.03□□□□□ -0.48
Col9a2Q07643 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.03□□□□□ -0.48
Col9a2Q07643 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC12.03□□□□□ -0.48
Col9a2Q07643 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Col9a2Q07643 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.03□□□□□ -0.48
Col9a2Q07643 Gm19918-201ENSMUST00000194858 400 ntBASIC12.03□□□□□ -0.48
Col9a2Q07643 Gm33080-201ENSMUST00000205429 172 ntBASIC12.03□□□□□ -0.48
Col9a2Q07643 Gm44605-201ENSMUST00000206892 949 ntBASIC12.03□□□□□ -0.48
Col9a2Q07643 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col9a2Q07643 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.03□□□□□ -0.48
Col9a2Q07643 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col9a2Q07643 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Col9a2Q07643 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col9a2Q07643 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Col9a2Q07643 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.03□□□□□ -0.48
Col9a2Q07643 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.03□□□□□ -0.48
Col9a2Q07643 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Col9a2Q07643 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col9a2Q07643 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col9a2Q07643 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col9a2Q07643 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col9a2Q07643 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col9a2Q07643 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col9a2Q07643 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col9a2Q07643 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Col9a2Q07643 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col9a2Q07643 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.02□□□□□ -0.49
Col9a2Q07643 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.02□□□□□ -0.49
Col9a2Q07643 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Col9a2Q07643 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.02□□□□□ -0.49
Col9a2Q07643 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Col9a2Q07643 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC12.02□□□□□ -0.49
Col9a2Q07643 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.02□□□□□ -0.49
Col9a2Q07643 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.02□□□□□ -0.49
Col9a2Q07643 Gm9574-201ENSMUST00000173127 845 ntBASIC12.02□□□□□ -0.49
Col9a2Q07643 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col9a2Q07643 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Col9a2Q07643 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Col9a2Q07643 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Col9a2Q07643 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.02□□□□□ -0.49
Col9a2Q07643 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col9a2Q07643 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.02□□□□□ -0.49
Col9a2Q07643 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col9a2Q07643 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.02□□□□□ -0.49
Col9a2Q07643 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col9a2Q07643 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a2Q07643 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.01□□□□□ -0.49
Col9a2Q07643 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col9a2Q07643 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col9a2Q07643 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a2Q07643 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a2Q07643 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a2Q07643 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a2Q07643 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a2Q07643 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a2Q07643 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a2Q07643 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col9a2Q07643 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a2Q07643 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a2Q07643 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a2Q07643 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a2Q07643 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a2Q07643 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col9a2Q07643 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a2Q07643 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a2Q07643 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.01□□□□□ -0.49
Col9a2Q07643 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms