Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Smn1P97801 Gm10782-202ENSMUST00000223775 1480 ntBASIC9.5□□□□□ -0.89
Smn1P97801 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Smn1P97801 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.5□□□□□ -0.89
Smn1P97801 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Smn1P97801 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Gm38357-201ENSMUST00000195382 2464 ntBASIC9.49□□□□□ -0.89
Smn1P97801 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.49□□□□□ -0.89
Smn1P97801 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.49□□□□□ -0.89
Smn1P97801 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smn1P97801 Gm12247-201ENSMUST00000117585 670 ntBASIC9.49□□□□□ -0.89
Smn1P97801 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.49□□□□□ -0.89
Smn1P97801 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smn1P97801 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.49□□□□□ -0.89
Smn1P97801 Gm37666-201ENSMUST00000194110 866 ntBASIC9.49□□□□□ -0.89
Smn1P97801 Gm38266-201ENSMUST00000194931 421 ntBASIC9.49□□□□□ -0.89
Smn1P97801 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC9.49□□□□□ -0.89
Smn1P97801 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.49□□□□□ -0.89
Smn1P97801 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC9.49□□□□□ -0.89
Smn1P97801 Gm45433-201ENSMUST00000209386 247 ntBASIC9.49□□□□□ -0.89
Smn1P97801 Gm5996-201ENSMUST00000211110 718 ntBASIC9.49□□□□□ -0.89
Smn1P97801 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smn1P97801 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smn1P97801 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.49□□□□□ -0.89
Smn1P97801 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.49□□□□□ -0.89
Smn1P97801 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
Smn1P97801 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smn1P97801 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Smn1P97801 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 Gm23949-201ENSMUST00000104027 127 ntBASIC9.48□□□□□ -0.89
Smn1P97801 Gm24255-201ENSMUST00000104481 128 ntBASIC9.48□□□□□ -0.89
Smn1P97801 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.48□□□□□ -0.89
Smn1P97801 Gm12380-201ENSMUST00000119012 544 ntBASIC9.48□□□□□ -0.89
Smn1P97801 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 Gm8566-201ENSMUST00000120174 465 ntBASIC9.48□□□□□ -0.89
Smn1P97801 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.48□□□□□ -0.89
Smn1P97801 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 Gm20482-202ENSMUST00000174729 825 ntBASIC9.48□□□□□ -0.89
Smn1P97801 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC9.48□□□□□ -0.89
Smn1P97801 Mir7085-201ENSMUST00000184353 66 ntBASIC9.48□□□□□ -0.89
Smn1P97801 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Smn1P97801 Gm38341-201ENSMUST00000195357 515 ntBASIC9.48□□□□□ -0.89
Smn1P97801 Gm42867-201ENSMUST00000202995 469 ntBASIC9.48□□□□□ -0.89
Smn1P97801 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.48□□□□□ -0.89
Smn1P97801 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC9.48□□□□□ -0.89
Smn1P97801 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smn1P97801 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Smn1P97801 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms