Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.05□□□□□ -0.48
CiitaP79621 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.05□□□□□ -0.48
CiitaP79621 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.05□□□□□ -0.48
CiitaP79621 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.05□□□□□ -0.48
CiitaP79621 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CiitaP79621 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.05□□□□□ -0.48
CiitaP79621 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.05□□□□□ -0.48
CiitaP79621 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.05□□□□□ -0.48
CiitaP79621 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.05□□□□□ -0.48
CiitaP79621 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CiitaP79621 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CiitaP79621 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.05□□□□□ -0.48
CiitaP79621 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CiitaP79621 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CiitaP79621 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.05□□□□□ -0.48
CiitaP79621 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
CiitaP79621 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC12.04□□□□□ -0.48
CiitaP79621 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.04□□□□□ -0.48
CiitaP79621 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.04□□□□□ -0.48
CiitaP79621 Gm13022-201ENSMUST00000121181 285 ntBASIC12.04□□□□□ -0.48
CiitaP79621 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CiitaP79621 Mir7035-201ENSMUST00000184713 82 ntBASIC12.04□□□□□ -0.48
CiitaP79621 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CiitaP79621 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CiitaP79621 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Gm5178-201ENSMUST00000219380 898 ntBASIC12.04□□□□□ -0.48
CiitaP79621 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CiitaP79621 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CiitaP79621 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CiitaP79621 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CiitaP79621 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CiitaP79621 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CiitaP79621 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CiitaP79621 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.04□□□□□ -0.48
CiitaP79621 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.04□□□□□ -0.48
CiitaP79621 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CiitaP79621 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CiitaP79621 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.04□□□□□ -0.48
CiitaP79621 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.03□□□□□ -0.48
CiitaP79621 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.03□□□□□ -0.48
CiitaP79621 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CiitaP79621 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CiitaP79621 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CiitaP79621 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.03□□□□□ -0.48
CiitaP79621 Gm14234-201ENSMUST00000119539 845 ntBASIC12.03□□□□□ -0.48
CiitaP79621 Gm24074-201ENSMUST00000158178 260 ntBASIC12.03□□□□□ -0.48
CiitaP79621 Mir8091-201ENSMUST00000183602 139 ntBASIC12.03□□□□□ -0.48
CiitaP79621 Gm28032-201ENSMUST00000184104 96 ntBASIC12.03□□□□□ -0.48
CiitaP79621 Gm7880-201ENSMUST00000203748 871 ntBASIC12.03□□□□□ -0.48
CiitaP79621 Gm6423-201ENSMUST00000204315 934 ntBASIC12.03□□□□□ -0.48
CiitaP79621 Gm18463-201ENSMUST00000207258 474 ntBASIC12.03□□□□□ -0.48
CiitaP79621 Gm18460-201ENSMUST00000208088 464 ntBASIC12.03□□□□□ -0.48
CiitaP79621 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.03□□□□□ -0.48
CiitaP79621 Gm18035-201ENSMUST00000211962 589 ntBASIC12.03□□□□□ -0.48
CiitaP79621 Gm9487-201ENSMUST00000216600 472 ntBASIC12.03□□□□□ -0.48
CiitaP79621 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CiitaP79621 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms