Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Nup43P59235 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.52□□□□□ -0.73
Nup43P59235 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup43P59235 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Nup43P59235 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Nup43P59235 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Nup43P59235 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Nup43P59235 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Nup43P59235 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.51□□□□□ -0.73
Nup43P59235 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.51□□□□□ -0.73
Nup43P59235 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.51□□□□□ -0.73
Nup43P59235 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.51□□□□□ -0.73
Nup43P59235 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Nup43P59235 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.51□□□□□ -0.73
Nup43P59235 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.51□□□□□ -0.73
Nup43P59235 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC10.51□□□□□ -0.73
Nup43P59235 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.51□□□□□ -0.73
Nup43P59235 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.51□□□□□ -0.73
Nup43P59235 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.51□□□□□ -0.73
Nup43P59235 Gm45878-201ENSMUST00000211839 241 ntBASIC10.51□□□□□ -0.73
Nup43P59235 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.51□□□□□ -0.73
Nup43P59235 CT009754.4-201ENSMUST00000221430 565 ntBASIC10.51□□□□□ -0.73
Nup43P59235 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.51□□□□□ -0.73
Nup43P59235 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Gm23680-201ENSMUST00000083162 164 ntBASIC10.51□□□□□ -0.73
Nup43P59235 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Nup43P59235 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Nup43P59235 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Nup43P59235 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Nup43P59235 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Nup43P59235 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Nup43P59235 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup43P59235 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Nup43P59235 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Nup43P59235 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Nup43P59235 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.5□□□□□ -0.73
Nup43P59235 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.5□□□□□ -0.73
Nup43P59235 Gm12986-201ENSMUST00000119037 967 ntBASIC10.5□□□□□ -0.73
Nup43P59235 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.5□□□□□ -0.73
Nup43P59235 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.5□□□□□ -0.73
Nup43P59235 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC10.5□□□□□ -0.73
Nup43P59235 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC10.5□□□□□ -0.73
Nup43P59235 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.5□□□□□ -0.73
Nup43P59235 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.5□□□□□ -0.73
Nup43P59235 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.5□□□□□ -0.73
Nup43P59235 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.5□□□□□ -0.73
Nup43P59235 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.5□□□□□ -0.73
Nup43P59235 Gm18556-201ENSMUST00000219748 1031 ntBASIC10.5□□□□□ -0.73
Nup43P59235 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.5□□□□□ -0.73
Nup43P59235 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.5□□□□□ -0.73
Nup43P59235 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.5□□□□□ -0.73
Nup43P59235 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.5□□□□□ -0.73
Nup43P59235 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms