Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gm23272-201ENSMUST00000104053 129 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gm11949-201ENSMUST00000117640 372 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gm15528-201ENSMUST00000117821 864 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gm12566-201ENSMUST00000121479 359 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gm21092-201ENSMUST00000178995 955 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 Mir7051-201ENSMUST00000184167 73 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 Mir8115-201ENSMUST00000184992 119 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gm37466-201ENSMUST00000195692 652 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gm17831-201ENSMUST00000205579 900 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gm5468-202ENSMUST00000227851 682 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gm5451-201ENSMUST00000080545 579 ntBASIC11.35□□□□□ -0.59
Tubgcp3P58854 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tubgcp3P58854 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.34□□□□□ -0.59
Tubgcp3P58854 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Gm14395-201ENSMUST00000120494 563 ntBASIC11.34□□□□□ -0.59
Tubgcp3P58854 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.34□□□□□ -0.59
Tubgcp3P58854 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.34□□□□□ -0.59
Tubgcp3P58854 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Tubgcp3P58854 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms