Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
CtskP55097 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CtskP55097 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CtskP55097 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.04□□□□□ -0.64
CtskP55097 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
CtskP55097 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.04□□□□□ -0.64
CtskP55097 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.04□□□□□ -0.64
CtskP55097 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Gm4294-201ENSMUST00000105169 614 ntBASIC11.04□□□□□ -0.64
CtskP55097 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.04□□□□□ -0.64
CtskP55097 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.04□□□□□ -0.64
CtskP55097 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.04□□□□□ -0.64
CtskP55097 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.04□□□□□ -0.64
CtskP55097 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.04□□□□□ -0.64
CtskP55097 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Gm9135-201ENSMUST00000182963 990 ntBASIC11.04□□□□□ -0.64
CtskP55097 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.04□□□□□ -0.64
CtskP55097 Gm18059-201ENSMUST00000208073 580 ntBASIC11.04□□□□□ -0.64
CtskP55097 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC11.04□□□□□ -0.64
CtskP55097 Gm5996-201ENSMUST00000211110 718 ntBASIC11.04□□□□□ -0.64
CtskP55097 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
CtskP55097 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.04□□□□□ -0.64
CtskP55097 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.04□□□□□ -0.64
CtskP55097 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CtskP55097 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CtskP55097 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.03□□□□□ -0.64
CtskP55097 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
CtskP55097 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CtskP55097 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CtskP55097 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.03□□□□□ -0.64
CtskP55097 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.03□□□□□ -0.64
CtskP55097 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.03□□□□□ -0.64
CtskP55097 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Gm5133-201ENSMUST00000118940 1255 ntBASIC11.03□□□□□ -0.64
CtskP55097 Gm16219-201ENSMUST00000120096 274 ntBASIC11.03□□□□□ -0.64
CtskP55097 Gm15549-201ENSMUST00000121595 622 ntBASIC11.03□□□□□ -0.64
CtskP55097 Gm11960-201ENSMUST00000122068 925 ntBASIC11.03□□□□□ -0.64
CtskP55097 Gm3344-201ENSMUST00000169610 603 ntBASIC11.03□□□□□ -0.64
CtskP55097 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CtskP55097 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.03□□□□□ -0.64
CtskP55097 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
CtskP55097 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.03□□□□□ -0.64
CtskP55097 Gm30671-201ENSMUST00000214898 318 ntBASIC11.03□□□□□ -0.64
CtskP55097 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CtskP55097 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.03□□□□□ -0.64
CtskP55097 Gm5468-202ENSMUST00000227851 682 ntBASIC11.03□□□□□ -0.64
CtskP55097 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CtskP55097 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CtskP55097 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CtskP55097 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
CtskP55097 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CtskP55097 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CtskP55097 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms