Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ddx6P54823 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ddx6P54823 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Ddx6P54823 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.32□□□□□ -0.6
Ddx6P54823 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.32□□□□□ -0.6
Ddx6P54823 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ddx6P54823 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ddx6P54823 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.32□□□□□ -0.6
Ddx6P54823 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 Gm12943-201ENSMUST00000119616 210 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 Gm15136-201ENSMUST00000120552 533 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.32□□□□□ -0.6
Ddx6P54823 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ddx6P54823 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ddx6P54823 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ddx6P54823 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ddx6P54823 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ddx6P54823 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ddx6P54823 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ddx6P54823 Gm9162-201ENSMUST00000182081 991 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.32□□□□□ -0.6
Ddx6P54823 Gm37852-201ENSMUST00000193027 350 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 Gm43249-201ENSMUST00000200464 458 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 Gm18042-201ENSMUST00000219887 790 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ddx6P54823 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ddx6P54823 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ddx6P54823 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ddx6P54823 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ddx6P54823 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx6P54823 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.32□□□□□ -0.6
Ddx6P54823 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ddx6P54823 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ddx6P54823 Gm14592-201ENSMUST00000117201 560 ntBASIC11.31□□□□□ -0.6
Ddx6P54823 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.31□□□□□ -0.6
Ddx6P54823 Gm11957-201ENSMUST00000118304 779 ntBASIC11.31□□□□□ -0.6
Ddx6P54823 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.31□□□□□ -0.6
Ddx6P54823 Gm11354-201ENSMUST00000121974 422 ntBASIC11.31□□□□□ -0.6
Ddx6P54823 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Gm12906-201ENSMUST00000154610 441 ntBASIC11.31□□□□□ -0.6
Ddx6P54823 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ddx6P54823 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.31□□□□□ -0.6
Ddx6P54823 Gm28032-201ENSMUST00000184104 96 ntBASIC11.31□□□□□ -0.6
Ddx6P54823 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.31□□□□□ -0.6
Ddx6P54823 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ddx6P54823 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ddx6P54823 Gm29763-201ENSMUST00000205306 616 ntBASIC11.31□□□□□ -0.6
Ddx6P54823 Gm33080-201ENSMUST00000205429 172 ntBASIC11.31□□□□□ -0.6
Ddx6P54823 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.31□□□□□ -0.6
Ddx6P54823 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms