Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdx1P52946 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pdx1P52946 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.97□□□□□ -0.65
Pdx1P52946 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.97□□□□□ -0.65
Pdx1P52946 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pdx1P52946 Gm12986-201ENSMUST00000119037 967 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 Gm12899-201ENSMUST00000120565 551 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 Gm4917-201ENSMUST00000121452 650 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Gm25343-201ENSMUST00000157460 107 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 Gm25554-201ENSMUST00000158075 113 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Pdx1P52946 Snord55-201ENSMUST00000174939 79 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pdx1P52946 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.97□□□□□ -0.65
Pdx1P52946 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Gm43380-201ENSMUST00000200421 220 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 Gm44158-201ENSMUST00000203881 505 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 Gm39288-201ENSMUST00000210554 446 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Pdx1P52946 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.97□□□□□ -0.65
Pdx1P52946 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pdx1P52946 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdx1P52946 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pdx1P52946 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdx1P52946 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdx1P52946 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdx1P52946 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.96□□□□□ -0.65
Pdx1P52946 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pdx1P52946 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Pdx1P52946 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdx1P52946 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdx1P52946 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.96□□□□□ -0.65
Pdx1P52946 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdx1P52946 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Pdx1P52946 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Pdx1P52946 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.96□□□□□ -0.65
Pdx1P52946 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.96□□□□□ -0.65
Pdx1P52946 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.96□□□□□ -0.65
Pdx1P52946 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.96□□□□□ -0.65
Pdx1P52946 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.96□□□□□ -0.65
Pdx1P52946 Gm8531-201ENSMUST00000188319 893 ntBASIC10.96□□□□□ -0.65
Pdx1P52946 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.96□□□□□ -0.65
Pdx1P52946 Gm9111-201ENSMUST00000219394 709 ntBASIC10.96□□□□□ -0.65
Pdx1P52946 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.96□□□□□ -0.65
Pdx1P52946 Gm18556-201ENSMUST00000219748 1031 ntBASIC10.96□□□□□ -0.65
Pdx1P52946 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdx1P52946 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdx1P52946 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pdx1P52946 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdx1P52946 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.96□□□□□ -0.66
Pdx1P52946 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pdx1P52946 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdx1P52946 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pdx1P52946 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdx1P52946 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.96□□□□□ -0.66
Pdx1P52946 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdx1P52946 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
Pdx1P52946 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pdx1P52946 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdx1P52946 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdx1P52946 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdx1P52946 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pdx1P52946 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms