Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SftpbP50405 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SftpbP50405 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.35□□□□□ -0.59
SftpbP50405 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SftpbP50405 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SftpbP50405 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SftpbP50405 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.34□□□□□ -0.59
SftpbP50405 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
SftpbP50405 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
SftpbP50405 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.34□□□□□ -0.59
SftpbP50405 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.34□□□□□ -0.59
SftpbP50405 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SftpbP50405 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SftpbP50405 Gm7851-201ENSMUST00000117574 323 ntBASIC11.34□□□□□ -0.59
SftpbP50405 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.34□□□□□ -0.59
SftpbP50405 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.34□□□□□ -0.59
SftpbP50405 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.34□□□□□ -0.59
SftpbP50405 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.34□□□□□ -0.59
SftpbP50405 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.34□□□□□ -0.59
SftpbP50405 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.34□□□□□ -0.59
SftpbP50405 Gm28450-201ENSMUST00000187349 638 ntBASIC11.34□□□□□ -0.59
SftpbP50405 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.34□□□□□ -0.59
SftpbP50405 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.34□□□□□ -0.59
SftpbP50405 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.34□□□□□ -0.59
SftpbP50405 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.34□□□□□ -0.59
SftpbP50405 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
SftpbP50405 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.34□□□□□ -0.59
SftpbP50405 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.34□□□□□ -0.59
SftpbP50405 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SftpbP50405 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
SftpbP50405 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.33□□□□□ -0.59
SftpbP50405 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
SftpbP50405 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.33□□□□□ -0.6
SftpbP50405 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.33□□□□□ -0.6
SftpbP50405 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Gm13809-201ENSMUST00000117921 597 ntBASIC11.33□□□□□ -0.6
SftpbP50405 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.33□□□□□ -0.6
SftpbP50405 Gm15374-201ENSMUST00000119313 844 ntBASIC11.33□□□□□ -0.6
SftpbP50405 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.33□□□□□ -0.6
SftpbP50405 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.33□□□□□ -0.6
SftpbP50405 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.33□□□□□ -0.6
SftpbP50405 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.33□□□□□ -0.6
SftpbP50405 Gm9540-201ENSMUST00000188230 478 ntBASIC11.33□□□□□ -0.6
SftpbP50405 Gm37246-201ENSMUST00000192665 835 ntBASIC11.33□□□□□ -0.6
SftpbP50405 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.33□□□□□ -0.6
SftpbP50405 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.33□□□□□ -0.6
SftpbP50405 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SftpbP50405 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SftpbP50405 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms