Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Gm37122-201ENSMUST00000195313 1567 ntBASIC7.1□□□□□ -1.27
Xcl1P47993 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC7.1□□□□□ -1.27
Xcl1P47993 Six6-201ENSMUST00000021519 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Xcl1P47993 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Xcl1P47993 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Xcl1P47993 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Xcl1P47993 Gm21759-201ENSMUST00000178345 1828 ntBASIC7.1□□□□□ -1.27
Xcl1P47993 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Xcl1P47993 Zbtb37-205ENSMUST00000171748 2141 ntTSL 5 BASIC7.1□□□□□ -1.27
Xcl1P47993 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Xcl1P47993 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Xcl1P47993 2310043P16Rik-201ENSMUST00000205403 3881 ntBASIC7.1□□□□□ -1.27
Xcl1P47993 Wdhd1-201ENSMUST00000111790 2962 ntTSL 2 BASIC7.1□□□□□ -1.27
Xcl1P47993 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Xcl1P47993 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Xcl1P47993 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Xcl1P47993 Trp63-203ENSMUST00000115304 2634 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Xcl1P47993 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Xcl1P47993 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC7.1□□□□□ -1.27
Xcl1P47993 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Xcl1P47993 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Xcl1P47993 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Xcl1P47993 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
Xcl1P47993 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Xcl1P47993 Zfp111-201ENSMUST00000056683 3380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Xcl1P47993 Zfp672-202ENSMUST00000064786 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Xcl1P47993 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 AC129931.1-201ENSMUST00000228865 1861 ntBASIC7.09□□□□□ -1.27
Xcl1P47993 Drosha-201ENSMUST00000090292 4519 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Dhx30-215ENSMUST00000198425 3968 ntTSL 5 BASIC7.09□□□□□ -1.27
Xcl1P47993 Gm28653-201ENSMUST00000185494 5276 ntBASIC7.09□□□□□ -1.27
Xcl1P47993 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC7.09□□□□□ -1.27
Xcl1P47993 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC7.09□□□□□ -1.27
Xcl1P47993 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Homer1-204ENSMUST00000102752 5713 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Zfp384-203ENSMUST00000084275 2829 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Wdr24-201ENSMUST00000026833 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Xcl1P47993 Gm13123-201ENSMUST00000122173 492 ntBASIC7.09□□□□□ -1.27
Xcl1P47993 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Xcl1P47993 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC7.09□□□□□ -1.27
Xcl1P47993 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC7.09□□□□□ -1.27
Xcl1P47993 Gm25661-201ENSMUST00000157704 296 ntBASIC7.09□□□□□ -1.27
Xcl1P47993 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Xcl1P47993 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC7.09□□□□□ -1.27
Xcl1P47993 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Gm28033-201ENSMUST00000184224 96 ntBASIC7.09□□□□□ -1.27
Xcl1P47993 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC7.09□□□□□ -1.27
Xcl1P47993 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC7.09□□□□□ -1.27
Xcl1P47993 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC7.09□□□□□ -1.27
Xcl1P47993 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC7.09□□□□□ -1.27
Xcl1P47993 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC7.09□□□□□ -1.27
Xcl1P47993 Gm45925-201ENSMUST00000218882 744 ntBASIC7.09□□□□□ -1.27
Xcl1P47993 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC7.09□□□□□ -1.27
Xcl1P47993 AC138767.1-201ENSMUST00000222661 415 ntBASIC7.09□□□□□ -1.27
Xcl1P47993 AC125209.1-201ENSMUST00000225812 766 ntBASIC7.09□□□□□ -1.27
Xcl1P47993 5430437J10Rik-202ENSMUST00000227355 634 ntBASIC7.09□□□□□ -1.27
Xcl1P47993 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Xcl1P47993 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Xcl1P47993 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Xcl1P47993 Gm37827-201ENSMUST00000194486 1542 ntBASIC7.09□□□□□ -1.27
Xcl1P47993 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Gm15903-202ENSMUST00000199631 3518 ntBASIC7.09□□□□□ -1.27
Xcl1P47993 Rasgrf1-203ENSMUST00000189545 4766 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Gm42879-201ENSMUST00000198656 2214 ntBASIC7.09□□□□□ -1.27
Xcl1P47993 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Pnpla1os-201ENSMUST00000146779 3946 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Gm36638-202ENSMUST00000192073 2169 ntBASIC7.09□□□□□ -1.27
Xcl1P47993 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Xcl1P47993 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Xcl1P47993 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Xcl1P47993 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Xcl1P47993 Slc28a1-201ENSMUST00000026820 2846 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Xcl1P47993 Dnajc14-201ENSMUST00000026410 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Xcl1P47993 Olfr450-202ENSMUST00000218832 1899 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Xcl1P47993 Pygm-202ENSMUST00000113483 2583 ntTSL 5 BASIC7.09□□□□□ -1.28
Xcl1P47993 CT010447.1-201ENSMUST00000225657 1608 ntBASIC7.09□□□□□ -1.28
Xcl1P47993 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Xcl1P47993 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
Xcl1P47993 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Xcl1P47993 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC7.08□□□□□ -1.28
Xcl1P47993 Gm44926-201ENSMUST00000207898 1826 ntBASIC7.08□□□□□ -1.28
Xcl1P47993 Zfx-203ENSMUST00000113926 6762 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms