Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm9097-201ENSMUST00000120514 880 ntBASIC11.46□□□□□ -0.57
Cxcl12P40224 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm13505-201ENSMUST00000121666 817 ntBASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm13857-201ENSMUST00000139645 173 ntBASIC11.46□□□□□ -0.57
Cxcl12P40224 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm4960-201ENSMUST00000182928 1001 ntBASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.46□□□□□ -0.57
Cxcl12P40224 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm37009-201ENSMUST00000193297 361 ntBASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC11.46□□□□□ -0.57
Cxcl12P40224 AC132384.2-201ENSMUST00000218018 526 ntBASIC11.46□□□□□ -0.57
Cxcl12P40224 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm9701-201ENSMUST00000077976 427 ntBASIC11.46□□□□□ -0.57
Cxcl12P40224 Gm10238-201ENSMUST00000089689 408 ntBASIC11.46□□□□□ -0.57
Cxcl12P40224 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcl12P40224 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cxcl12P40224 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Cxcl12P40224 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcl12P40224 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcl12P40224 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcl12P40224 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcl12P40224 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Cxcl12P40224 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.46□□□□□ -0.58
Cxcl12P40224 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Cxcl12P40224 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.46□□□□□ -0.58
Cxcl12P40224 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcl12P40224 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.46□□□□□ -0.58
Cxcl12P40224 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcl12P40224 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Cxcl12P40224 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcl12P40224 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cxcl12P40224 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcl12P40224 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcl12P40224 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcl12P40224 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcl12P40224 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.45□□□□□ -0.58
Cxcl12P40224 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.45□□□□□ -0.58
Cxcl12P40224 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cxcl12P40224 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Cxcl12P40224 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC11.45□□□□□ -0.58
Cxcl12P40224 Gm13777-201ENSMUST00000118208 345 ntBASIC11.45□□□□□ -0.58
Cxcl12P40224 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC11.45□□□□□ -0.58
Cxcl12P40224 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Gm20091-201ENSMUST00000179683 189 ntBASIC11.45□□□□□ -0.58
Cxcl12P40224 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC11.45□□□□□ -0.58
Cxcl12P40224 Gm42859-201ENSMUST00000199572 193 ntBASIC11.45□□□□□ -0.58
Cxcl12P40224 Gm5311-201ENSMUST00000203518 709 ntBASIC11.45□□□□□ -0.58
Cxcl12P40224 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.45□□□□□ -0.58
Cxcl12P40224 Gm44917-201ENSMUST00000208798 520 ntBASIC11.45□□□□□ -0.58
Cxcl12P40224 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.45□□□□□ -0.58
Cxcl12P40224 Gm9619-201ENSMUST00000211587 762 ntBASIC11.45□□□□□ -0.58
Cxcl12P40224 Gm5040-201ENSMUST00000218609 800 ntBASIC11.45□□□□□ -0.58
Cxcl12P40224 AC155300.1-201ENSMUST00000219134 480 ntBASIC11.45□□□□□ -0.58
Cxcl12P40224 AC163638.2-201ENSMUST00000224920 827 ntBASIC11.45□□□□□ -0.58
Cxcl12P40224 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cxcl12P40224 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcl12P40224 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Cxcl12P40224 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cxcl12P40224 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Cxcl12P40224 Gm7061-201ENSMUST00000118127 1416 ntBASIC11.44□□□□□ -0.58
Cxcl12P40224 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcl12P40224 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.44□□□□□ -0.58
Cxcl12P40224 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms