Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1P40201 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1P40201 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1P40201 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Chd1P40201 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Chd1P40201 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC16.29■□□□□ 0.2
Chd1P40201 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1P40201 Gm26483-201ENSMUST00000158016 104 ntBASIC16.29■□□□□ 0.2
Chd1P40201 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Chd1P40201 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Chd1P40201 Apoc3-201ENSMUST00000034586 526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1P40201 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC16.29■□□□□ 0.2
Chd1P40201 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1P40201 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1P40201 Bcl2-202ENSMUST00000189999 2841 ntBASIC16.29■□□□□ 0.2
Chd1P40201 Gm43172-201ENSMUST00000202139 2137 ntBASIC16.29■□□□□ 0.2
Chd1P40201 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC16.29■□□□□ 0.2
Chd1P40201 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1P40201 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Chd1P40201 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1P40201 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1P40201 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1P40201 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC16.29■□□□□ 0.2
Chd1P40201 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC16.29■□□□□ 0.2
Chd1P40201 Gm32914-201ENSMUST00000203815 2228 ntBASIC16.29■□□□□ 0.2
Chd1P40201 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Gm19114-201ENSMUST00000193972 1357 ntBASIC16.28■□□□□ 0.2
Chd1P40201 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Chd1P40201 1700084F23Rik-201ENSMUST00000186662 1044 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Gm3116-201ENSMUST00000189440 1116 ntBASIC16.28■□□□□ 0.2
Chd1P40201 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC16.28■□□□□ 0.2
Chd1P40201 Gm17815-201ENSMUST00000198305 895 ntBASIC16.28■□□□□ 0.2
Chd1P40201 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Chd1P40201 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 CT009757.3-201ENSMUST00000223367 2320 ntBASIC16.28■□□□□ 0.2
Chd1P40201 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Chd1P40201 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1P40201 Gm12499-201ENSMUST00000121961 546 ntBASIC16.28■□□□□ 0.2
Chd1P40201 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC16.28■□□□□ 0.2
Chd1P40201 Gm5205-201ENSMUST00000182253 1003 ntBASIC16.28■□□□□ 0.2
Chd1P40201 Gm37012-201ENSMUST00000194991 1078 ntBASIC16.28■□□□□ 0.2
Chd1P40201 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC16.28■□□□□ 0.2
Chd1P40201 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC16.28■□□□□ 0.2
Chd1P40201 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Chd1P40201 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd1P40201 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Chd1P40201 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC16.27■□□□□ 0.2
Chd1P40201 Tes-201ENSMUST00000076654 2685 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chd1P40201 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd1P40201 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Chd1P40201 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd1P40201 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd1P40201 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd1P40201 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Chd1P40201 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC16.27■□□□□ 0.19
Chd1P40201 Gm11493-201ENSMUST00000134567 566 ntTSL 3 BASIC16.27■□□□□ 0.19
Chd1P40201 Gm5459-201ENSMUST00000171235 798 ntBASIC16.27■□□□□ 0.19
Chd1P40201 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC16.27■□□□□ 0.19
Chd1P40201 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC16.27■□□□□ 0.19
Chd1P40201 Gm29651-201ENSMUST00000189088 697 ntBASIC16.27■□□□□ 0.19
Chd1P40201 Spin3-ps-201ENSMUST00000192825 770 ntBASIC16.27■□□□□ 0.19
Chd1P40201 6430531B16Rik-205ENSMUST00000210254 952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd1P40201 Gm21818-202ENSMUST00000225144 894 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Chd1P40201 AC113282.4-201ENSMUST00000225273 903 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Chd1P40201 Gm8420-201ENSMUST00000097103 598 ntBASIC16.27■□□□□ 0.19
Chd1P40201 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd1P40201 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd1P40201 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd1P40201 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd1P40201 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Chd1P40201 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chd1P40201 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd1P40201 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd1P40201 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Chd1P40201 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC16.26■□□□□ 0.19
Chd1P40201 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Chd1P40201 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chd1P40201 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chd1P40201 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chd1P40201 Gm13527-201ENSMUST00000117926 691 ntBASIC16.26■□□□□ 0.19
Chd1P40201 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Chd1P40201 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chd1P40201 Gm6467-201ENSMUST00000171547 609 ntBASIC16.26■□□□□ 0.19
Chd1P40201 Prdx5-204ENSMUST00000173091 501 ntTSL 5 BASIC16.26■□□□□ 0.19
Chd1P40201 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC16.26■□□□□ 0.19
Chd1P40201 4930500F04Rik-203ENSMUST00000202177 576 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chd1P40201 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC16.26■□□□□ 0.19
Chd1P40201 Gm7664-201ENSMUST00000221988 745 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms