Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Sftpa1P35242 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sftpa1P35242 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.3□□□□□ -0.76
Sftpa1P35242 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.3□□□□□ -0.76
Sftpa1P35242 Mir1249-201ENSMUST00000116791 98 ntBASIC10.3□□□□□ -0.76
Sftpa1P35242 Gm13700-201ENSMUST00000118624 1128 ntBASIC10.3□□□□□ -0.76
Sftpa1P35242 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC10.3□□□□□ -0.76
Sftpa1P35242 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC10.3□□□□□ -0.76
Sftpa1P35242 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Gm27390-201ENSMUST00000184516 176 ntBASIC10.3□□□□□ -0.76
Sftpa1P35242 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.3□□□□□ -0.76
Sftpa1P35242 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.3□□□□□ -0.76
Sftpa1P35242 Gm29808-201ENSMUST00000194419 468 ntBASIC10.3□□□□□ -0.76
Sftpa1P35242 Gm37723-201ENSMUST00000194480 565 ntBASIC10.3□□□□□ -0.76
Sftpa1P35242 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC10.3□□□□□ -0.76
Sftpa1P35242 AC107752.1-201ENSMUST00000219362 469 ntBASIC10.3□□□□□ -0.76
Sftpa1P35242 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.3□□□□□ -0.76
Sftpa1P35242 CT030195.2-201ENSMUST00000226074 1286 ntBASIC10.3□□□□□ -0.76
Sftpa1P35242 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Sftpa1P35242 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.3□□□□□ -0.76
Sftpa1P35242 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.3□□□□□ -0.76
Sftpa1P35242 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.3□□□□□ -0.76
Sftpa1P35242 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.3□□□□□ -0.76
Sftpa1P35242 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sftpa1P35242 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.3□□□□□ -0.76
Sftpa1P35242 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Sftpa1P35242 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.3□□□□□ -0.76
Sftpa1P35242 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sftpa1P35242 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.29□□□□□ -0.76
Sftpa1P35242 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.29□□□□□ -0.76
Sftpa1P35242 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.29□□□□□ -0.76
Sftpa1P35242 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm6755-201ENSMUST00000100598 864 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm6740-201ENSMUST00000100617 864 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Sftpa1P35242 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm12947-201ENSMUST00000116114 420 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm4917-201ENSMUST00000121452 650 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm29304-201ENSMUST00000186555 695 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm29223-201ENSMUST00000188867 695 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm37851-201ENSMUST00000193871 889 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm37921-201ENSMUST00000194333 695 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm43564-201ENSMUST00000196185 211 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm30055-201ENSMUST00000203175 803 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm7880-201ENSMUST00000203748 871 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm44605-201ENSMUST00000206892 949 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm6518-201ENSMUST00000208450 342 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.29□□□□□ -0.76
Sftpa1P35242 AC164087.2-201ENSMUST00000216206 1072 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sftpa1P35242 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms