Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nckap1P28660 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.12□□□□□ -0.63
Nckap1P28660 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.11□□□□□ -0.63
Nckap1P28660 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nckap1P28660 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Nckap1P28660 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.11□□□□□ -0.63
Nckap1P28660 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nckap1P28660 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.11□□□□□ -0.63
Nckap1P28660 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.11□□□□□ -0.63
Nckap1P28660 Gm12389-201ENSMUST00000117696 418 ntBASIC11.11□□□□□ -0.63
Nckap1P28660 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Gm25343-201ENSMUST00000157460 107 ntBASIC11.11□□□□□ -0.63
Nckap1P28660 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.11□□□□□ -0.63
Nckap1P28660 Gm43912-201ENSMUST00000204352 538 ntBASIC11.11□□□□□ -0.63
Nckap1P28660 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.11□□□□□ -0.63
Nckap1P28660 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.11□□□□□ -0.63
Nckap1P28660 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nckap1P28660 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.11□□□□□ -0.63
Nckap1P28660 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Nckap1P28660 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Nckap1P28660 Capsl-202ENSMUST00000226688 739 ntBASIC11.11□□□□□ -0.63
Nckap1P28660 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Nckap1P28660 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nckap1P28660 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.11□□□□□ -0.63
Nckap1P28660 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Nckap1P28660 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nckap1P28660 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.1□□□□□ -0.63
Nckap1P28660 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nckap1P28660 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nckap1P28660 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Nckap1P28660 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.1□□□□□ -0.63
Nckap1P28660 Gm14497-201ENSMUST00000119537 580 ntBASIC11.1□□□□□ -0.63
Nckap1P28660 Gm5257-201ENSMUST00000121823 790 ntBASIC11.1□□□□□ -0.63
Nckap1P28660 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.1□□□□□ -0.63
Nckap1P28660 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.1□□□□□ -0.63
Nckap1P28660 Gm17214-201ENSMUST00000164501 541 ntBASIC11.1□□□□□ -0.63
Nckap1P28660 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nckap1P28660 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.1□□□□□ -0.63
Nckap1P28660 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.1□□□□□ -0.63
Nckap1P28660 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.1□□□□□ -0.63
Nckap1P28660 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.1□□□□□ -0.63
Nckap1P28660 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.1□□□□□ -0.63
Nckap1P28660 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.1□□□□□ -0.63
Nckap1P28660 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.1□□□□□ -0.63
Nckap1P28660 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.1□□□□□ -0.63
Nckap1P28660 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.1□□□□□ -0.63
Nckap1P28660 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nckap1P28660 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nckap1P28660 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms