Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hmgn1P18608 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hmgn1P18608 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hmgn1P18608 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Hmgn1P18608 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Hmgn1P18608 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.13□□□□□ -0.79
Hmgn1P18608 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hmgn1P18608 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm25881-201ENSMUST00000157783 103 ntBASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm24749-201ENSMUST00000157838 343 ntBASIC10.12□□□□□ -0.79
Hmgn1P18608 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm27530-201ENSMUST00000184096 98 ntBASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm29499-201ENSMUST00000189151 486 ntBASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm28329-201ENSMUST00000191208 689 ntBASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm29171-201ENSMUST00000191397 486 ntBASIC10.12□□□□□ -0.79
Hmgn1P18608 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm19208-201ENSMUST00000213861 912 ntBASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm9111-201ENSMUST00000219394 709 ntBASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.12□□□□□ -0.79
Hmgn1P18608 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.12□□□□□ -0.79
Hmgn1P18608 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.12□□□□□ -0.79
Hmgn1P18608 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.12□□□□□ -0.79
Hmgn1P18608 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hmgn1P18608 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.11□□□□□ -0.79
Hmgn1P18608 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Hmgn1P18608 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Hmgn1P18608 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.11□□□□□ -0.79
Hmgn1P18608 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Hmgn1P18608 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.11□□□□□ -0.79
Hmgn1P18608 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.11□□□□□ -0.79
Hmgn1P18608 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.11□□□□□ -0.79
Hmgn1P18608 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.11□□□□□ -0.79
Hmgn1P18608 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Hmgn1P18608 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Hmgn1P18608 Gm7741-201ENSMUST00000181445 989 ntBASIC10.11□□□□□ -0.79
Hmgn1P18608 Mir8109-201ENSMUST00000184375 117 ntBASIC10.11□□□□□ -0.79
Hmgn1P18608 Gm38341-201ENSMUST00000195357 515 ntBASIC10.11□□□□□ -0.79
Hmgn1P18608 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Hmgn1P18608 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.11□□□□□ -0.79
Hmgn1P18608 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Hmgn1P18608 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hmgn1P18608 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms