Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Hmga1P17095 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga1P17095 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmga1P17095 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.31□□□□□ -0.6
Hmga1P17095 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.31□□□□□ -0.6
Hmga1P17095 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.31□□□□□ -0.6
Hmga1P17095 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Gm12712-201ENSMUST00000120676 801 ntBASIC11.31□□□□□ -0.6
Hmga1P17095 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.31□□□□□ -0.6
Hmga1P17095 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.31□□□□□ -0.6
Hmga1P17095 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmga1P17095 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.31□□□□□ -0.6
Hmga1P17095 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hmga1P17095 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hmga1P17095 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hmga1P17095 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.31□□□□□ -0.6
Hmga1P17095 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmga1P17095 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.31□□□□□ -0.6
Hmga1P17095 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.31□□□□□ -0.6
Hmga1P17095 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga1P17095 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.3□□□□□ -0.6
Hmga1P17095 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hmga1P17095 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hmga1P17095 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Hmga1P17095 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Gm11979-201ENSMUST00000119629 743 ntBASIC11.3□□□□□ -0.6
Hmga1P17095 Gm11993-201ENSMUST00000121861 820 ntBASIC11.3□□□□□ -0.6
Hmga1P17095 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.3□□□□□ -0.6
Hmga1P17095 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.3□□□□□ -0.6
Hmga1P17095 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.3□□□□□ -0.6
Hmga1P17095 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.3□□□□□ -0.6
Hmga1P17095 Gm25677-201ENSMUST00000174983 72 ntBASIC11.3□□□□□ -0.6
Hmga1P17095 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Gm37852-201ENSMUST00000193027 350 ntBASIC11.3□□□□□ -0.6
Hmga1P17095 Gm42433-201ENSMUST00000196806 940 ntBASIC11.3□□□□□ -0.6
Hmga1P17095 Gm17889-201ENSMUST00000198410 598 ntBASIC11.3□□□□□ -0.6
Hmga1P17095 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.3□□□□□ -0.6
Hmga1P17095 Gm8162-201ENSMUST00000213951 665 ntBASIC11.3□□□□□ -0.6
Hmga1P17095 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.3□□□□□ -0.6
Hmga1P17095 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.3□□□□□ -0.6
Hmga1P17095 Gm26782-203ENSMUST00000227103 751 ntBASIC11.3□□□□□ -0.6
Hmga1P17095 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.3□□□□□ -0.6
Hmga1P17095 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmga1P17095 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms