Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Olfml3-204ENSMUST00000169286 874 ntBASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.12□□□□□ -0.47
Chmp6P0C0A3 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Gm5051-201ENSMUST00000204085 485 ntBASIC12.12□□□□□ -0.47
Chmp6P0C0A3 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.12□□□□□ -0.47
Chmp6P0C0A3 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.12□□□□□ -0.47
Chmp6P0C0A3 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Gm14460-201ENSMUST00000121511 639 ntBASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Mir7051-201ENSMUST00000184167 73 ntBASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Chmp6P0C0A3 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.11□□□□□ -0.47
Chmp6P0C0A3 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp6P0C0A3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms