Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.57□□□□□ -0.4
Surf1P09925 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Surf1P09925 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Surf1P09925 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Surf1P09925 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Surf1P09925 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Surf1P09925 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Surf1P09925 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.57□□□□□ -0.4
Surf1P09925 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Surf1P09925 Gm16219-201ENSMUST00000120096 274 ntBASIC12.57□□□□□ -0.4
Surf1P09925 Gm37284-201ENSMUST00000193607 539 ntBASIC12.57□□□□□ -0.4
Surf1P09925 Gm17825-201ENSMUST00000206836 794 ntBASIC12.57□□□□□ -0.4
Surf1P09925 Gm45856-201ENSMUST00000212752 416 ntBASIC12.57□□□□□ -0.4
Surf1P09925 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.57□□□□□ -0.4
Surf1P09925 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.57□□□□□ -0.4
Surf1P09925 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.57□□□□□ -0.4
Surf1P09925 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.57□□□□□ -0.4
Surf1P09925 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Surf1P09925 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Surf1P09925 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Surf1P09925 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Surf1P09925 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Surf1P09925 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Surf1P09925 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Surf1P09925 CT868720.1-201ENSMUST00000223069 2544 ntBASIC12.57□□□□□ -0.4
Surf1P09925 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Surf1P09925 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.57□□□□□ -0.4
Surf1P09925 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Surf1P09925 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.57□□□□□ -0.4
Surf1P09925 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Surf1P09925 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.57□□□□□ -0.4
Surf1P09925 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Surf1P09925 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Surf1P09925 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Surf1P09925 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Surf1P09925 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.57□□□□□ -0.4
Surf1P09925 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.56□□□□□ -0.4
Surf1P09925 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Surf1P09925 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Surf1P09925 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.56□□□□□ -0.4
Surf1P09925 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.56□□□□□ -0.4
Surf1P09925 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Surf1P09925 Gm16166-201ENSMUST00000118291 787 ntBASIC12.56□□□□□ -0.4
Surf1P09925 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.56□□□□□ -0.4
Surf1P09925 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.56□□□□□ -0.4
Surf1P09925 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.56□□□□□ -0.4
Surf1P09925 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.56□□□□□ -0.4
Surf1P09925 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.56□□□□□ -0.4
Surf1P09925 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.56□□□□□ -0.4
Surf1P09925 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Surf1P09925 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Surf1P09925 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Surf1P09925 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.56□□□□□ -0.4
Surf1P09925 Gm45089-201ENSMUST00000208082 2040 ntBASIC12.55□□□□□ -0.4
Surf1P09925 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Surf1P09925 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Surf1P09925 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Surf1P09925 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.55□□□□□ -0.4
Surf1P09925 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Surf1P09925 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Surf1P09925 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Surf1P09925 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.55□□□□□ -0.4
Surf1P09925 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Surf1P09925 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Surf1P09925 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Surf1P09925 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Surf1P09925 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Surf1P09925 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.55□□□□□ -0.4
Surf1P09925 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Surf1P09925 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Surf1P09925 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.55□□□□□ -0.4
Surf1P09925 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Surf1P09925 Gm11667-201ENSMUST00000119828 486 ntBASIC12.55□□□□□ -0.4
Surf1P09925 Gm12516-201ENSMUST00000120819 385 ntBASIC12.55□□□□□ -0.4
Surf1P09925 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.55□□□□□ -0.4
Surf1P09925 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.55□□□□□ -0.4
Surf1P09925 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.55□□□□□ -0.4
Surf1P09925 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms