Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc9P09633 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc9P09633 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.33□□□□□ -0.11
Hoxc9P09633 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc9P09633 Bcl2-202ENSMUST00000189999 2841 ntBASIC14.33□□□□□ -0.11
Hoxc9P09633 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc9P09633 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc9P09633 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc9P09633 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxc9P09633 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxc9P09633 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxc9P09633 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Hoxc9P09633 Gm17796-201ENSMUST00000189015 1213 ntBASIC14.33□□□□□ -0.12
Hoxc9P09633 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxc9P09633 AC154213.1-201ENSMUST00000228234 583 ntBASIC14.33□□□□□ -0.12
Hoxc9P09633 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxc9P09633 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Gm43931-201ENSMUST00000204817 2870 ntBASIC14.33□□□□□ -0.12
Hoxc9P09633 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Hoxc9P09633 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxc9P09633 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hoxc9P09633 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hoxc9P09633 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc9P09633 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.33□□□□□ -0.12
Hoxc9P09633 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Gm8684-201ENSMUST00000195078 1564 ntBASIC14.32□□□□□ -0.12
Hoxc9P09633 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hoxc9P09633 Gm16209-201ENSMUST00000118457 627 ntBASIC14.32□□□□□ -0.12
Hoxc9P09633 Gm15031-201ENSMUST00000121341 210 ntBASIC14.32□□□□□ -0.12
Hoxc9P09633 Gm10171-201ENSMUST00000126220 628 ntBASIC14.32□□□□□ -0.12
Hoxc9P09633 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC14.32□□□□□ -0.12
Hoxc9P09633 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Gm7047-201ENSMUST00000196224 1063 ntBASIC14.32□□□□□ -0.12
Hoxc9P09633 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC14.32□□□□□ -0.12
Hoxc9P09633 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hoxc9P09633 Gm10233-201ENSMUST00000089275 628 ntBASIC14.32□□□□□ -0.12
Hoxc9P09633 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hoxc9P09633 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14.32□□□□□ -0.12
Hoxc9P09633 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc9P09633 AC154354.1-203ENSMUST00000225565 1364 ntBASIC14.32□□□□□ -0.12
Hoxc9P09633 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc9P09633 Gm37264-201ENSMUST00000194916 2192 ntBASIC14.32□□□□□ -0.12
Hoxc9P09633 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc9P09633 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC14.31□□□□□ -0.12
Hoxc9P09633 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 AC153380.1-201ENSMUST00000214959 2364 ntBASIC14.31□□□□□ -0.12
Hoxc9P09633 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc9P09633 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 Gm23255-201ENSMUST00000102244 110 ntBASIC14.31□□□□□ -0.12
Hoxc9P09633 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Hoxc9P09633 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc9P09633 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc9P09633 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC14.31□□□□□ -0.12
Hoxc9P09633 Gm37860-201ENSMUST00000195380 1034 ntBASIC14.31□□□□□ -0.12
Hoxc9P09633 Gm42833-201ENSMUST00000196019 2124 ntBASIC14.31□□□□□ -0.12
Hoxc9P09633 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms