Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.41□□□□□ -0.74
Tuba1bP05213 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Tuba1bP05213 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.41□□□□□ -0.74
Tuba1bP05213 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.41□□□□□ -0.74
Tuba1bP05213 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Tuba1bP05213 Rps4l-202ENSMUST00000204242 789 ntBASIC10.41□□□□□ -0.74
Tuba1bP05213 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.41□□□□□ -0.74
Tuba1bP05213 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.41□□□□□ -0.74
Tuba1bP05213 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Tuba1bP05213 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.41□□□□□ -0.74
Tuba1bP05213 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.41□□□□□ -0.74
Tuba1bP05213 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tuba1bP05213 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Tuba1bP05213 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC10.41□□□□□ -0.74
Tuba1bP05213 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.41□□□□□ -0.74
Tuba1bP05213 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tuba1bP05213 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.4□□□□□ -0.74
Tuba1bP05213 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Gm11573-201ENSMUST00000119956 394 ntBASIC10.4□□□□□ -0.74
Tuba1bP05213 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.4□□□□□ -0.74
Tuba1bP05213 Gm27530-201ENSMUST00000184096 98 ntBASIC10.4□□□□□ -0.74
Tuba1bP05213 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Gm28686-201ENSMUST00000187404 609 ntBASIC10.4□□□□□ -0.74
Tuba1bP05213 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Gm8956-201ENSMUST00000203939 825 ntBASIC10.4□□□□□ -0.74
Tuba1bP05213 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.4□□□□□ -0.74
Tuba1bP05213 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.4□□□□□ -0.74
Tuba1bP05213 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Tuba1bP05213 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.4□□□□□ -0.74
Tuba1bP05213 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tuba1bP05213 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tuba1bP05213 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.4□□□□□ -0.75
Tuba1bP05213 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Tuba1bP05213 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tuba1bP05213 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tuba1bP05213 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Tuba1bP05213 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.75
Tuba1bP05213 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Tuba1bP05213 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tuba1bP05213 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tuba1bP05213 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tuba1bP05213 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.39□□□□□ -0.75
Tuba1bP05213 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tuba1bP05213 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tuba1bP05213 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.39□□□□□ -0.75
Tuba1bP05213 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tuba1bP05213 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tuba1bP05213 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.39□□□□□ -0.75
Tuba1bP05213 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tuba1bP05213 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tuba1bP05213 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tuba1bP05213 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms