Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.57□□□□□ -0.88
H3f3cP02301 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
H3f3cP02301 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.57□□□□□ -0.88
H3f3cP02301 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.57□□□□□ -0.88
H3f3cP02301 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Gm25076-201ENSMUST00000104098 132 ntBASIC9.57□□□□□ -0.88
H3f3cP02301 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.57□□□□□ -0.88
H3f3cP02301 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.57□□□□□ -0.88
H3f3cP02301 Gm12218-201ENSMUST00000117666 399 ntBASIC9.57□□□□□ -0.88
H3f3cP02301 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.57□□□□□ -0.88
H3f3cP02301 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
H3f3cP02301 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC9.57□□□□□ -0.88
H3f3cP02301 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Gm23694-201ENSMUST00000179335 110 ntBASIC9.57□□□□□ -0.88
H3f3cP02301 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Gm9645-201ENSMUST00000197131 792 ntBASIC9.57□□□□□ -0.88
H3f3cP02301 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC9.57□□□□□ -0.88
H3f3cP02301 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.57□□□□□ -0.88
H3f3cP02301 Gm18974-201ENSMUST00000221478 1031 ntBASIC9.57□□□□□ -0.88
H3f3cP02301 AC154680.1-201ENSMUST00000224376 859 ntBASIC9.57□□□□□ -0.88
H3f3cP02301 AC124433.1-201ENSMUST00000224483 1063 ntBASIC9.57□□□□□ -0.88
H3f3cP02301 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Gm6430-201ENSMUST00000054664 1248 ntBASIC9.57□□□□□ -0.88
H3f3cP02301 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
H3f3cP02301 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.57□□□□□ -0.88
H3f3cP02301 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
H3f3cP02301 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.57□□□□□ -0.88
H3f3cP02301 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
H3f3cP02301 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.57□□□□□ -0.88
H3f3cP02301 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H3f3cP02301 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
H3f3cP02301 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
H3f3cP02301 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.56□□□□□ -0.88
H3f3cP02301 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
H3f3cP02301 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
H3f3cP02301 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
H3f3cP02301 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
H3f3cP02301 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
H3f3cP02301 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
H3f3cP02301 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.56□□□□□ -0.88
H3f3cP02301 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.56□□□□□ -0.88
H3f3cP02301 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
H3f3cP02301 Gm12463-201ENSMUST00000118271 849 ntBASIC9.56□□□□□ -0.88
H3f3cP02301 Gm12616-201ENSMUST00000118594 382 ntBASIC9.56□□□□□ -0.88
H3f3cP02301 Gm16071-201ENSMUST00000119589 793 ntBASIC9.56□□□□□ -0.88
H3f3cP02301 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.56□□□□□ -0.88
H3f3cP02301 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
H3f3cP02301 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
H3f3cP02301 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms