Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Hmgb3O54879 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hmgb3O54879 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Hmgb3O54879 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hmgb3O54879 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hmgb3O54879 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.15□□□□□ -0.95
Hmgb3O54879 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hmgb3O54879 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hmgb3O54879 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.15□□□□□ -0.95
Hmgb3O54879 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Hmgb3O54879 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hmgb3O54879 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hmgb3O54879 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hmgb3O54879 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hmgb3O54879 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Hmgb3O54879 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.14□□□□□ -0.95
Hmgb3O54879 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.14□□□□□ -0.95
Hmgb3O54879 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.14□□□□□ -0.95
Hmgb3O54879 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.14□□□□□ -0.95
Hmgb3O54879 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Hmgb3O54879 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.14□□□□□ -0.95
Hmgb3O54879 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.14□□□□□ -0.95
Hmgb3O54879 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.14□□□□□ -0.95
Hmgb3O54879 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hmgb3O54879 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hmgb3O54879 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hmgb3O54879 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Hmgb3O54879 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Hmgb3O54879 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hmgb3O54879 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hmgb3O54879 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Hmgb3O54879 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hmgb3O54879 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Hmgb3O54879 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.13□□□□□ -0.95
Hmgb3O54879 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hmgb3O54879 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Hmgb3O54879 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC9.13□□□□□ -0.95
Hmgb3O54879 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hmgb3O54879 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Hmgb3O54879 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Hmgb3O54879 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hmgb3O54879 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hmgb3O54879 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hmgb3O54879 Gm14644-201ENSMUST00000116671 647 ntBASIC9.13□□□□□ -0.95
Hmgb3O54879 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Hmgb3O54879 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC9.13□□□□□ -0.95
Hmgb3O54879 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.13□□□□□ -0.95
Hmgb3O54879 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hmgb3O54879 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.13□□□□□ -0.95
Hmgb3O54879 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.13□□□□□ -0.95
Hmgb3O54879 Mospd4-201ENSMUST00000180618 576 ntBASIC9.13□□□□□ -0.95
Hmgb3O54879 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.13□□□□□ -0.95
Hmgb3O54879 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hmgb3O54879 Gm6013-201ENSMUST00000212264 699 ntBASIC9.13□□□□□ -0.95
Hmgb3O54879 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms